Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02794 ATGGAAAACTCGGACGAAAGAAACGAACAACTTCCCTTCTCTCCAAACCCTAACAGTGCCGACGACGACGAAATCGACGAACAGGAGGACGAAGAGGAAGAGGAAGAGGAAGAAGACGACGGTCATGACGACGTCGTTTCGCACGAGCCTTACAATCGGAACAACCGATCCTCATTGTCGAGTTTGCGCGAGCAGCGTTCGAAGCTGGAAACCCTCTCCCGGCGTTTGGCTTCGGAGCTGGTCCCTATCCGCGTCCACGATGTGCTGATTCGCGGCAACACCAAGACTAAGGATTGGGTGATCGAGGCGGAGCTCAAGCTTCTCCAGGACGCCGCCACCGTGCAGGAGCTCATTAGCGCCTCCGAAATCGCCCTCGCCAAGCTCCGCAGCCTCGAGATTTTCGAGTCCACCGAGCTCACGCTCCAGGCCGGGCCGCCGGAGCTGCCTCACACCGCCAATGTCGTCGTCGACGTTGTCGAGACCGCCAACAAAGTCTCCGGCGAATTCGGCGTTTACACCAAACCCTCGACAAGTTCGTGGACTGCTGAAGGGGGTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCCTCTTTGGCTTATGGTGGCAGCCAAGCAACAGAGGTGAGTGTAGGAGTGTTTGCTCCAAGACTGAAAGGGTTGTTAACTCCTCTTGTAGCACGACTTTCCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAGTTGTTAGGATTGTCCCTTGGCTTAATCTCAACCAGGCACCATGACTTAGTCTACACTCTTGGATGGCGTACCTTGACTGATCCATTACAAATGTCATCCAGGTCCATAAGGAGGCAGCTTGGGCATGGTTTATTATCATCTTTGAAGTATACATTTAAAATTGACAGGAGAAACTCACCAATTAGGCCTACAAAGGGATATGCTTTTCTTTCCACTACTCACTTTGGTGGCCTTACACCAGATCATCGGAGCTTGCGATTTCTACGCCAGGAATTTGATGTTCGCTGTGCCATCCCCTTTGGATTTTATAATACAGCTCTTAACCTTGGGATTTCAGCTGGCGCCGTTTTTCCATGGGGGCATGACTTCATGAACAAGCCATCTCCTCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCTATAACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACCTCGAAGGAGAGGTAGAGATGAAATTATTGATGACAATGATGATTCCTCTAAATGGGACTTCATTGGAGGAGATGTGGCTGTTACAGCATTTGCAGACCTGTCTTTCGATCTCCCGGTTAGGTGGTTGAGAAATCATGGAATCCATGGTCATCTTTTTGCTGGTGCTGGAAATACTGCAAAATTGACTCAGAATGAATATAAGCGCTTTTCACCTCGGAAGTTCTTAGAATCATTTCGAACTTCAGTTGGATGTGGATTTGTTGTTCCTACTAAACTTTTTCGCCTAGAGGGTAACTTCTACTACGTACTCAAGCAGGATGAACATGATCGTGGGAAGACAGGATTTAGGTTCAGCTTCTCAGCTCCTTCTTAG 1611 0.4848 MENSDERNEQLPFSPNPNSADDDEIDEQEDEEEEEEEEDDGHDDVVSHEPYNRNNRSSLSSLREQRSKLETLSRRLASELVPIRVHDVLIRGNTKTKDWVIEAELKLLQDAATVQELISASEIALAKLRSLEIFESTELTLQAGPPELPHTANVVVDVVETANKVSGEFGVYTKPSTSSWTAEGGLKYKNLLGYGDLWDASLAYGGSQATEVSVGVFAPRLKGLLTPLVARLSMLSQDWQEFSSYKEQLLGLSLGLISTRHHDLVYTLGWRTLTDPLQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSPIRPTKGYAFLSTTHFGGLTPDHRSLRFLRQEFDVRCAIPFGFYNTALNLGISAGAVFPWGHDFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRRGRDEIIDDNDDSSKWDFIGGDVAVTAFADLSFDLPVRWLRNHGIHGHLFAGAGNTAKLTQNEYKRFSPRKFLESFRTSVGCGFVVPTKLFRLEGNFYYVLKQDEHDRGKTGFRFSFSAPS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02794 536 FunFam Outer membrane OMP85 family protein 172 534 - -
Phco2g02794 536 MobiDBLite consensus disorder prediction 1 63 - -
Phco2g02794 536 FunFam Outer membrane OMP85 family protein 82 161 - -
Phco2g02794 536 Coils Coil 59 79 - -
Phco2g02794 536 MobiDBLite consensus disorder prediction 20 43 - -
Phco2g02794 536 Coils Coil 18 38 - -
Phco2g02794 536 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 172 534 - -
Phco2g02794 536 Gene3D membrane protein fhac 82 161 - -
Phco2g02794 536 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 29 533 IPR039910 -
Phco2g02794 536 Pfam Omp85 superfamily domain 190 533 IPR000184 GO:0019867
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02794 Phco-Chr2 57366647 57370791 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02794 2 57366647 57370791 Phco2g02794 2 57366647 57370791 ECH
Phco2g02794 2 57366647 57370791 Phco3g00764 3 6345812 6350579 PCT