Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00758 ATGTCGATTCGCGATTCCGAAGCCTTCAATTGGCACTATGACGAGTTCGACAACCAGGCCCTCGAAATCCGCGGCCGCAAGCTCTTCTTCATCATCGTCCTTTTCTCCATCGTCCTCCTCTTCACCGCGCTCTTCATCTTCGCGCGCCGGATCTGCCACCAGCACGGCCTCCTCTTCGATGCCGTCCCGTCGCACCACGCGGCGCCGGTGCTTCCTTCTCAGGACGGCCTCGACGCCGCTGCGATCAAGCGGATACCGATCATCCTTCACCAGCGCGCGGCGACGGAGGAGACGGAGTGCAGCATCTGCCTCGGCGCGTTCGTCGACGGCGCGAAGCTGAAGGTTCTCCCTGGATGCGAGCACCGGTTCCACAGCGAGTGCGTGGACAAGTGGCTCGCGAATCACTCCAATTGCCCTCTCTGCAGAGCTTCGGTGAAACTCGATCCTTCTTTTCCGAGGATTTTGATCCAAGCGCCACCTATTAGAACCGCTCTTCCTCTCTGA 504 0.5992 MSIRDSEAFNWHYDEFDNQALEIRGRKLFFIIVLFSIVLLFTALFIFARRICHQHGLLFDAVPSHHAAPVLPSQDGLDAAAIKRIPIILHQRAATEETECSICLGAFVDGAKLKVLPGCEHRFHSECVDKWLANHSNCPLCRASVKLDPSFPRILIQAPPIRTALPL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00758 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 28 146 IPR044675 -
Phco3g00758 167 CDD RING-H2_RNF6-like 99 142 - -
Phco3g00758 167 SUPERFAMILY RING/U-box 86 149 - -
Phco3g00758 167 SMART ring_2 100 141 IPR001841 -
Phco3g00758 167 Pfam Ring finger domain 99 142 IPR001841 -
Phco3g00758 167 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Phco3g00758 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 147 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00758 Phco-Chr3 6283061 6283564 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02789 2 57325314 57326569 Phco3g00758 3 6283061 6283564 PCT