Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00737 ATGGGAAACAACATGGCAACCCACAACAAATACAAAAGTTTATTGTTCTTTATCAGAAAGTTCAAGGTCATCGAGCCAGTTCCACCTCAAGACCTTGAGGAGGCGTTTTCAAAGTTCACAGGAGGAGAGTCCCACATGTCCGTGGAGCAGCTCCACCGTTTCATGGTGGAGCACCAGGGTGAAAAGCACTACACCTTGTCGGATTCGGAAAAAGTTTTTGAGAAGGTTTTGCAGGAGAGAAAGACGTGTCAAGAAACTGTTAAGGTTGATCACAACCGAGAACATGAGATCGCCCTGGACGAACTCTTCCGATTTTTGCTTCATAATGATTTCAATGCTCCCTTGAAAGCCCAGGTACATCATGATATGGGGGCTCCATTGTCACATTACTTCATATATACAGGCCATAACTCCTATTTGACAGGGAATCAGCTCAGCAGTGACTGCAGTAAAGAGCCAATCATAAAGGCTTTGAAACGAGGCGTGCGTATTATCGAACTTGATTTATGGCCAACTTGCAAAAAGGATGATATTAAAGTAGATCATGGATGGACTCTTACCAACCCTGTCTCAGTGGTGAAATGTCTAGAGTGCATAAAGGAATATGGTTTTGTTGCATCTCAGTACCCAGTGATCATAACCATAGAAGACCATCTTACAACAGATCTTCGAGCTAAATTTGCAGAAATGGTAACTCAAATATTTGGGGAAGTGCTTTATTACCCTGGGGAAGAATGCTTAATAGAATTCCCTTCACCAGAATCACTGAAAAATCGAATCATTATATCCACCAAACCCCCAAGAGAACGTTTTGAGTCCAACCAAATCAAGGACAACAGCAACAGTCCTTTGCTGAATGAAAGTGAATCATCTGAAGAGGAATCATTCGGAAATGCATCTCCAAACTCCAGTAGGAACGAAGTAGAGACTGAGGACACACAGAATGACAGTGATCCTGATGAGGGAAGCATAAGTGCGAGCGAATATGACCAGAAACCATATTTGGAGTGTTCACCTGATTACAAACGCATAATTACTATCCGTAATAGGAAACTGAAGGGTTGCCTGAAGGAGAAATTGAGAACTGAAGGTGAAGTTAGACGCCTAAGTTGGAGTGAGAATACTCTTGAAAAGGCTTCAGAATCGCATGGAACAGATATTCTTAGGTTCACACAGAAAAATATACTCAGGGTTTACCCGAGTGCAATGCGTGTCAAATCCACAAATTTCAAGCCACATATTGGGTGGATGTATGGGGCTCAGATGGTTGCATTCAATATGCAGGGCCATGGCAAATCGCTGTGGTTGATGCAGGGAATGTTCAGGGCAAATGGAGGATGTGGTTATGTAAAGAAACCTCAAATTCTAATGCAGAAGCATCAATGTGGCAATGAGTTTGATCCTACAAGGATACAGTCAGTGAAGAAGAAGACATTAAAGGTTAAAGTATACATGGGACACGGATGGAGCTCAGATTTCAGTCCTACATACTTTGATAAGTTCTCTCCGCCAGACTTCTTCACTAAGATCCGAATTATTGGAATGCCTGGTGATGTTGCAAAGAACAAAACAAAGGTCATCATGGACAACTGGTTTCCTGTTTGGAATGAAGAATTTGAATTCTCTTTAAGTGTTCCAGAGCTTGCACTGCTGCTGATACAAGTAAAGGACAAAGATCAGGGAAAGGATGACTTTGCTGGGCAGACATGTTTACCAGTGTCAGAGTTAAAACATGGATTTCGCTCTGTGCCTTTATACAACAAAAAGGGAGAGAAATTTAAATCTGTCAAGCTCTTGATGCGATTTCAGCTTGAATGA 1818 0.4191 MGNNMATHNKYKSLLFFIRKFKVIEPVPPQDLEEAFSKFTGGESHMSVEQLHRFMVEHQGEKHYTLSDSEKVFEKVLQERKTCQETVKVDHNREHEIALDELFRFLLHNDFNAPLKAQVHHDMGAPLSHYFIYTGHNSYLTGNQLSSDCSKEPIIKALKRGVRIIELDLWPTCKKDDIKVDHGWTLTNPVSVVKCLECIKEYGFVASQYPVIITIEDHLTTDLRAKFAEMVTQIFGEVLYYPGEECLIEFPSPESLKNRIIISTKPPRERFESNQIKDNSNSPLLNESESSEEESFGNASPNSSRNEVETEDTQNDSDPDEGSISASEYDQKPYLECSPDYKRIITIRNRKLKGCLKEKLRTEGEVRRLSWSENTLEKASESHGTDILRFTQKNILRVYPSAMRVKSTNFKPHIGWMYGAQMVAFNMQGHGKSLWLMQGMFRANGGCGYVKKPQILMQKHQCGNEFDPTRIQSVKKKTLKVKVYMGHGWSSDFSPTYFDKFSPPDFFTKIRIIGMPGDVAKNKTKVIMDNWFPVWNEEFEFSLSVPELALLLIQVKDKDQGKDDFAGQTCLPVSELKHGFRSVPLYNKKGEKFKSVKLLMRFQLE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00737 605 PRINTS Phospholipase C signature 416 434 IPR001192 GO:0035556
Phco3g00737 605 PRINTS Phospholipase C signature 571 581 IPR001192 GO:0035556
Phco3g00737 605 PRINTS Phospholipase C signature 395 416 IPR001192 GO:0035556
Phco3g00737 605 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Phco3g00737 605 PRINTS Phospholipase C signature 249 266 IPR001192 GO:0035556
Phco3g00737 605 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Phco3g00737 605 MobiDBLite consensus disorder prediction 276 308 - -
Phco3g00737 605 MobiDBLite consensus disorder prediction 269 329 - -
Phco3g00737 605 CDD C2_PLC_like 484 605 - -
Phco3g00737 605 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 16 604 IPR001192 GO:0035556
Phco3g00737 605 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 478 603 IPR035892 -
Phco3g00737 605 ProSiteProfiles C2 domain profile. 460 587 IPR000008 -
Phco3g00737 605 SUPERFAMILY EF-hand 17 123 IPR011992 -
Phco3g00737 605 SMART C2_3c 478 585 IPR000008 -
Phco3g00737 605 SMART plcy_3 341 457 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00737 605 Gene3D - 27 116 - -
Phco3g00737 605 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 469 IPR017946 GO:0006629|GO:0008081
Phco3g00737 605 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 265 - -
Phco3g00737 605 FunFam Phosphoinositide phospholipase C 473 605 - -
Phco3g00737 605 Pfam C2 domain 478 579 IPR000008 -
Phco3g00737 605 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 370 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00737 605 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 366 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco3g00737 605 SMART plcx_3 121 265 IPR000909 -
Phco3g00737 605 Gene3D C2 domain 470 605 IPR035892 -
Phco3g00737 605 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 265 IPR000909 -
Phco3g00737 605 SUPERFAMILY PLC-like phosphodiesterases 121 458 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00737 Phco-Chr3 6036272 6040009 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02773 2 57177926 57181475 Phco3g00737 3 6036272 6040009 PCT