Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02773 ATGAAAATTGAAGCATTCAAGATCAAGATGTTAAATTTGTTGACCAAAAAGGATGAGGTTTACAAGGCAGAACCCCCTTTGGATCTTAAGGAAGCCTTCTCCAAGTTTGCGAGAGGAGGGAACCGAATGAATAAGGGTCAGCTTCTTCAGTTCATTGTGGAGCACCAGGGAGAAAATATTTGCAGCGAAGAGGATTTGGATAAAATAATTGAGAAATATTTGCTAGTAGGGAGTTGTAGTTCTAGCTCTAAAACAAGATGTACAAGAATTCCTGATGTATACAAGAAACAAGGGTTAAGTCTCAGTGACTTCATCGATTTTCTGCTTCAGCATGATTTCAATGCTGCCTTGAATGACGAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCATGTATACGGGACACAATTCCTATCTGACCGGGAATCAACTTACCAGTGAGAGCAGTGACGAGCCAATTATAGAGGCTTTGAAACAAGGTGTACGAGTAATTGAACTAGATTTATGGCCATCTAAATCTCCAACTAAAGATGGTATTAAAGTGGTTCACGGAAGAACTTTTACCACTCCAGTCCCCGTACGCACATGTCTACAATCCATAAAGAAATATGCATTTTATAAATCAGATTACCCAGTAATTCTTACTTTGGAAGACCACCTAAAACCAAAACATCAGGATAAATTTGCAGAAATGGCATCTGAAATACTTGGAGAAATGCTTTATTTTCCGCAGACAGATTCTTTGACAGAATTCCCCTCACCAGAATCATTGAGAAACCGGATAATTATATCAACCAAACCACCAAAGGAATATCAGCAATCTGACAGTATCTGCAAAAGAAAAGCTGTGTCAAATGGATTTGAACCCCCAGAAGAAGAATCATGGGGACTGGAATTGTCAGATTCCGTGGCTAAACTGAAAACTGGGGACAAGCGGAATGCAAGTGATGCAGATCGGGAAAATATAAATACAAGCGATAACATTCCAAACCAACTAGGTGTATGTCGATACAAACACTTGATCACAATCCAGGGTGGGAAAGCAAAAGGTTCTATGAAGGATCAATTAAAAGATGACATTAAAGTTAGACGGCTTAGTTTGAGTGAGAAGAAACTAAAAAGTGCTTCTGAGTCTCATGGAGCTGACCTCATTAGGTTCACACAGAAAAATATCCTCAGGGTTTTTCCTAAAGGAGAACGTGTCAAATCCTCAAATTTCAGGCCACATTTAGGGTGGATGTACGGAGCTCAGATGGTTGCATTCAATATGCAGGGGCATGGCAAATCACTTCGGTTGATGCAGGGAATGTTCAGAGCAAATGGAGGATGTGGTTATGTTAAAAAGCCTGAATTTATAATCCGAACACTTCCACATGACGAGGTGTTTGATCCTAAAAAGCCACTGCCAGTGAAGGAGATCTTAAAAGTAAAAGTATACAAAGGAGATGGTTGGAGTTTAGATTTCAGTCCAACACACTTTGATCGGTTCTCTCCACCAGACTTTTACACAAAGGTGTGTATAGTTGGAGTGCCAGGTGATTGTGTGAAGAAGAAAACAAGTGTAAAGGTGGACACATGGCATCCTGTTTGGGATGAAGAATTTAAATTCGAATTGAGGGTTCCTGAGCTTGCTTTACTTCGGATAGAAGTAAAGGACAAAGATAAGGGGAAAGATGACTTTGCAGGACAAACTTGTTTGCCAGTATCAGAGCTAAGGCAGGGGTTCCGGTCAGTTCCTCTGTTTGACCCCAAGGGAAGGAAATTTAAATCTGTGAAGCTTCTAATGCGCTTTAAGATCGAAACCTTAGATAAATTGTAG 1827 0.4007 MKIEAFKIKMLNLLTKKDEVYKAEPPLDLKEAFSKFARGGNRMNKGQLLQFIVEHQGENICSEEDLDKIIEKYLLVGSCSSSSKTRCTRIPDVYKKQGLSLSDFIDFLLQHDFNAALNDEVHHDMNAPLSHYFMYTGHNSYLTGNQLTSESSDEPIIEALKQGVRVIELDLWPSKSPTKDGIKVVHGRTFTTPVPVRTCLQSIKKYAFYKSDYPVILTLEDHLKPKHQDKFAEMASEILGEMLYFPQTDSLTEFPSPESLRNRIIISTKPPKEYQQSDSICKRKAVSNGFEPPEEESWGLELSDSVAKLKTGDKRNASDADRENINTSDNIPNQLGVCRYKHLITIQGGKAKGSMKDQLKDDIKVRRLSLSEKKLKSASESHGADLIRFTQKNILRVFPKGERVKSSNFRPHLGWMYGAQMVAFNMQGHGKSLRLMQGMFRANGGCGYVKKPEFIIRTLPHDEVFDPKKPLPVKEILKVKVYKGDGWSLDFSPTHFDRFSPPDFYTKVCIVGVPGDCVKKKTSVKVDTWHPVWDEEFKFELRVPELALLRIEVKDKDKGKDDFAGQTCLPVSELRQGFRSVPLFDPKGRKFKSVKLLMRFKIETLDKL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02773 608 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 468 IPR017946 GO:0006629|GO:0008081
Phco2g02773 608 Gene3D C2 domain 470 607 IPR035892 -
Phco2g02773 608 SMART plcx_3 123 269 IPR000909 -
Phco2g02773 608 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco2g02773 608 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 123 269 - -
Phco2g02773 608 SUPERFAMILY PLC-like phosphodiesterases 123 456 IPR017946 GO:0006629|GO:0008081
Phco2g02773 608 PRINTS Phospholipase C signature 394 415 IPR001192 GO:0035556
Phco2g02773 608 PRINTS Phospholipase C signature 128 146 IPR001192 GO:0035556
Phco2g02773 608 PRINTS Phospholipase C signature 154 174 IPR001192 GO:0035556
Phco2g02773 608 PRINTS Phospholipase C signature 253 270 IPR001192 GO:0035556
Phco2g02773 608 PRINTS Phospholipase C signature 569 579 IPR001192 GO:0035556
Phco2g02773 608 PRINTS Phospholipase C signature 415 433 IPR001192 GO:0035556
Phco2g02773 608 ProSiteProfiles C2 domain profile. 458 585 IPR000008 -
Phco2g02773 608 SMART plcy_3 340 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco2g02773 608 Pfam C2 domain 476 577 IPR000008 -
Phco2g02773 608 Pfam Phosphatidylinositol-specific phospholipase C, X domain 125 269 IPR000909 -
Phco2g02773 608 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 476 601 IPR035892 -
Phco2g02773 608 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 369 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Phco2g02773 608 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 19 602 IPR001192 GO:0035556
Phco2g02773 608 SUPERFAMILY EF-hand 3 115 IPR011992 -
Phco2g02773 608 Gene3D - 25 120 - -
Phco2g02773 608 FunFam Phosphoinositide phospholipase C 471 603 - -
Phco2g02773 608 CDD C2_PLC_like 474 603 - -
Phco2g02773 608 SMART C2_3c 476 583 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02773 Phco-Chr2 57177926 57181475 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02773 2 57177926 57181475 Phco2g02773 2 57177926 57181475 ECH
Phco2g02773 2 57177926 57181475 Phco3g00737 3 6036272 6040009 PCT