Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00686 ATGGAGGCTTTATGCAACAAGGGTGAAAATTTTCAGAAGAAAAAAGACGGGTTTCCTTCTTCTGCCAGTGATTCAACTCAAGAACTCAAAGGGTGTGCTTCTCCTCCTCTTGGTTGGCCTATTCGGAAGGCTGCACTCTCCAAATGCCGCAAATCAGATGAGAAAGAAAATGAACCTGTTTCTCACTTGGAAGATAAAAAATTTACCAGCATCAGTTCAAAAATGCCAGGAATCGATGCAATGAAGGAAAGGTTTGCAAAATTACTGCTTGGGGAAGACATGTCAGGATCTGGGAAAGGAGTCTGCAGTGCTTTGGCCATCTCAAATGCCGTTACAAATCTGTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTGTTCCTTGTGAAAAGAAAGAAATGTGGCGGAGGGAGATGGAATGGCTTCTTAGTGTTAGTGATCACATTGTTGAGTTAATACCTTCTTGGCAGACATTTCCAGATGGAAGTAAGCTAGAGGTAATGACTTGCAGACCAAGGTCAGACCTTTTTATGAATCTTCCAGCCCTGCGCAAACTCGACAACATGCTTCTTGAAATTTTAGACAGTTGCCAAGATATGGAGTTTTGGTATGTTGACCAAGGAATTGTAGCCCAAGATTCAGAGGGTTCAGCTTCATTTTGCAAAAGAATTCAGCGACAAGAGGATAAGTGGTGGCTCCCTGTACCTCGTGTGCCCCCTGCCGGCCTCAGTGAGAACTCGAGAAAGCAGTTGAATCACACAAGAGAATGTGCAAGTCAAATTCTAAAAGCTGCCATGGCTATCAACAACGGTGCTTTAGCTGAAATGGCAGTTCCAGAGTCTTACTTGGAAACCCTTCCCAAGAATGGAAGAACTTGTTTGGGGGATTTTATTTACCATTACATTACATCAGAGAAATTCTCTCCAGAATGTCTTCTTGACTGCCTAGACCTATCCTCCGAGCATGTGGCACTTGAGATTGCAAACCGTGTTGAAGCCTCAATATATGTGTGGCGTAGAAGAGCTAACTCTAAACCCCCACCTAATCCTAACCGTTCAACTACAAAGTCATCGTGGGAAATTGTGAAGGACTTCATGGCTGACGGAGATAAGAGAGAACTACTAGCAGAAAGAGCTGAAAATGTTCTACTTTCACTGAAGCAAAAATTTCCTGGTCTAACTCAAACTACCTTGGATACCAGCAAGATTCAGTTCAACAAGGATGTTGGAAAATCCATACTAGAGAGCTATTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGCATAGACGATTTGCTGTATGTGGATGACTTGACTAAACATTCAGATAGGTTTCCATTGGTTCCAATGACAGTGTCCGTCTCAGGCACTCCTCACAAAGCAGTTGGCACACCAAGCTTTTCAGCGGCACCACCACTAATTAGTCCTGCAAGGGGAGAGAGATCTCCTTTCCTCAACAACAACAACAACATTAACAATAACAACATCAAACCTCAACGTCGTGGTTTTGGGGTGAGAAGAGTATTGTCAAATTATCTTGGTGCAGAATCAAAAGAAACAAAGATATTTAGCAATCCTAGTGTGGTGAATGGTTCAAACCCAAGCAGCAACAAAGCAGAAAAGAAGGCACATGCCATGAATGACAAGACAAAATGA 1668 0.4281 MEALCNKGENFQKKKDGFPSSASDSTQELKGCASPPLGWPIRKAALSKCRKSDEKENEPVSHLEDKKFTSISSKMPGIDAMKERFAKLLLGEDMSGSGKGVCSALAISNAVTNLCATVFGQLWRLEPVPCEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGSKLEVMTCRPRSDLFMNLPALRKLDNMLLEILDSCQDMEFWYVDQGIVAQDSEGSASFCKRIQRQEDKWWLPVPRVPPAGLSENSRKQLNHTRECASQILKAAMAINNGALAEMAVPESYLETLPKNGRTCLGDFIYHYITSEKFSPECLLDCLDLSSEHVALEIANRVEASIYVWRRRANSKPPPNPNRSTTKSSWEIVKDFMADGDKRELLAERAENVLLSLKQKFPGLTQTTLDTSKIQFNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDLTKHSDRFPLVPMTVSVSGTPHKAVGTPSFSAAPPLISPARGERSPFLNNNNNINNNNIKPQRRGFGVRRVLSNYLGAESKETKIFSNPSVVNGSNPSSNKAEKKAHAMNDKTK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00686 555 MobiDBLite consensus disorder prediction 527 544 - -
Phco3g00686 555 FunFam Rop guanine nucleotide exchange factor 14 310 449 - -
Phco3g00686 555 MobiDBLite consensus disorder prediction 527 555 - -
Phco3g00686 555 Gene3D PRONE domain, subdomain 1 71 306 - -
Phco3g00686 555 Gene3D PRONE domain, subdomain 1 307 449 - -
Phco3g00686 555 MobiDBLite consensus disorder prediction 1 39 - -
Phco3g00686 555 MobiDBLite consensus disorder prediction 16 30 - -
Phco3g00686 555 FunFam Rop guanine nucleotide exchange factor 7 278 406 - -
Phco3g00686 555 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 23 488 IPR038937 GO:0005085
Phco3g00686 555 ProSiteProfiles PRONE domain profile. 68 450 IPR005512 GO:0005085
Phco3g00686 555 FunFam Rop guanine nucleotide exchange factor 1 69 309 - -
Phco3g00686 555 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 78 444 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00686 Phco-Chr3 5595827 5598523 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02725 2 56768266 56775744 Phco3g00686 3 5595827 5598523 ECH
Phco3g00686 3 5595827 5598523 Phco3g00686 3 5595827 5598523 ECH
Phco2g02725 2 56768266 56775744 Phco3g00686 3 5595827 5598523 PCT