Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02725 ATGGATGCTTTTTCCAACAAGAAACAAACTTCTCAAAGCAAAACAGATGGGGTTTCCTCTTGTCTCACGGATTCCACTGCAGACTCCAGGGAAACCAGTTTCTGTGGATCCACTTCTTCAGTTTCCGTTGAAGAAGCAAAGGCAAAAGGCTCTTCTTCACCCCCTCCTCTTGGTTGGCCCATTCTCAAGGCTACAATCTCCAAGCGCTCTAATTCTCATGAAAAAGAAAACAAGCTTAAATCCCACTCGGAAGACAGTAAGCTTACTCGGATTGGTTTGAACCAGTCAGTAGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATCTCTAATGCCATTACTAATCTGTGTGCAACTGTATTTGGGCAATTATGGAGACTAGAACCTCTACCTTCTGAGAAGAAAGAAATGTGGCAGAGAGAGGTGGAGTGGCTTGTTAGTGTTAGCGATTACATTGTTGAATTGATGCCTTCTTGGCAAACATTTCCTGATGGGAGTAAACTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTTTATGAACCTTCCAGCTCTTCGCAAACTTGACAACATGCTTCTCGAAATTTTGGATAGTTTCACTGCTACAGAGTTCTGGTATGTAGACCAAGGAATTGTAGCCGCAGAAGCAGATGGTTCAGCCTCTTTTCGCAAAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCCGTACCTCGTGTCCCCCCTGCAGGACTCAGTGAAGACTCAAGGAAACACTTGAATTACTCTCGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGGCTATCAACAACATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAGTTCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTGTTTACCGTTACATAACATCAGATCAGTTCTCCCAAGAGTACCTTCTTGATTGCTTAGACATATCGTCTGAACATGTTGCATTAGAGATTGCAAACCGTGTGGAAGCAGCAATTTATGTGTGGCGCCGAAGAGTTCACTCTCGGTTCTCACCATCACCAAGGCCCAACCGTTCTACCACAAAATCATCATGGGAAATAGTCAAGGACTTCATGCTTGATGGAGATAAGAGAGAATTGCTAGCAGATAGAGCTGAAAACATTCTAATTTCCCTGAGGCAACGGTTCCCAGGCTTAAGTCAAACCACCCTTGATACCAGCAAGATCCAGTGCAACAAGGATGTTGGAAAAGCCGTGCTAGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCATTTAACATTGTAGCTCGTATAGATGATTTGCTATATGTGGATGACTTGACCAAACATTCAGAGAGGTTTGCATTGGTTCCTACTACTACTACTACTACAGCTAACGTGGTTTCTCAGCAGAAGAAGGTTACACGTCCACACTCGGTGTCTATCTCAGGCACTGTTACTCCGCACAAAGCAGCAGTTGGCACGCTAAGCTTTTCACCAGCTTCTGTGCCACTCATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCCATAACAACAACAGCATCAAACCTCAACGTCGTGGCTTTGGGGTGAGGAGAGTGCTGTCAAATTATCTTGGAGTAGAGACTGCCACTAAGATATGCAGCAACTCAACTGAGGTGAAATGTTCAAACCCAAGTAGCAAGAAAACTGAACAACAACGTGAGAATAACAAAACCAAATGA 1779 0.4407 MDAFSNKKQTSQSKTDGVSSCLTDSTADSRETSFCGSTSSVSVEEAKAKGSSSPPPLGWPILKATISKRSNSHEKENKLKSHSEDSKLTRIGLNQSVVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWQREVEWLVSVSDYIVELMPSWQTFPDGSKLEVMTCRPRTDIFMNLPALRKLDNMLLEILDSFTATEFWYVDQGIVAAEADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKHLNYSRECANQILKAAMAINNIALAEMEVPESYLEVLPKNGRTCLGDFVYRYITSDQFSQEYLLDCLDISSEHVALEIANRVEAAIYVWRRRVHSRFSPSPRPNRSTTKSSWEIVKDFMLDGDKRELLADRAENILISLRQRFPGLSQTTLDTSKIQCNKDVGKAVLESYSRVLESMAFNIVARIDDLLYVDDLTKHSERFALVPTTTTTTANVVSQQKKVTRPHSVSISGTVTPHKAAVGTLSFSPASVPLISPARGERTPFLHNNNSIKPQRRGFGVRRVLSNYLGVETATKICSNSTEVKCSNPSSKKTEQQRENNKTK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02725 592 MobiDBLite consensus disorder prediction 1 47 - -
Phco2g02725 592 Gene3D PRONE domain, subdomain 1 92 330 - -
Phco2g02725 592 Gene3D PRONE domain, subdomain 1 331 472 - -
Phco2g02725 592 ProSiteProfiles PRONE domain profile. 88 472 IPR005512 GO:0005085
Phco2g02725 592 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 98 466 IPR005512 GO:0005085
Phco2g02725 592 FunFam Rop guanine nucleotide exchange factor 14 330 471 - -
Phco2g02725 592 MobiDBLite consensus disorder prediction 570 592 - -
Phco2g02725 592 MobiDBLite consensus disorder prediction 1 60 - -
Phco2g02725 592 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 15 535 IPR038937 GO:0005085
Phco2g02725 592 FunFam Rop guanine nucleotide exchange factor 1 90 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02725 Phco-Chr2 56768266 56775744 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02725 2 56768266 56775744 Phco2g02725 2 56768266 56775744 ECH
Phco2g02725 2 56768266 56775744 Phco3g00686 3 5595827 5598523 ECH
Phco2g02725 2 56768266 56775744 Phco3g00686 3 5595827 5598523 PCT