Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00657 ATGAAAGCGAACCAGGGCCTAATAGTCAAATCAGTTCTCATAGAAGATGCTCTCAGATCCATATTTCTGGAGGGAGATGGAGGAGAAGGATTTGGGGATTGTTCTTCTTGGATTCATTCATTCTACTTGTGGATTCCGACTCGTCTCGTTGACTCGGTCCGGGTTGGAGTAGACTCAGCTCGCTTTTTCATTCTCGCCGATCTAAAGGAAAGTAAAGGGCACATCAAAATGAAGGCATTGATTCTGGTTGGGGGATTTGGAACAAGGTTGAGGCCACTAACACTCAGTTTCCCTAAGCCTCTTGTTGATTTTGCTAACAAGCCTATGATTCTGCATCAGATAGAGGCCCTTAAGGCCATTGGAGTTACTGAGGTGGTGCTAGCCATCAATTACCAACCAGAGGTTATGTTGAATTTTTTGAAGGATTTTGAAACAAAGCTTGGCATCAAGATCACTTGTTCGCAAGAAACTGAACCACTAGGAACAGCAGGTCCCCTGGCTCTTGCTAGAGATAAGCTGATAGATAACTCTGGGGAGCCCTTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTTAAAGAAATGATTGAATTCCATAAAGGCCACGGAGGAGAGGCTTCCATAATGGTAACAAAGGTGGACGAGCCATCAAAATATGGTGTGGTTGTGATGGAAGATAGCACAGGACAGGTTGATAAATTTGTTGAGAAACCGAAATTGTTTGTTGGCAACAAAATCAATGCTGGAATTTACCTGCTGAACCCCTCTGTTTTGAATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCTGCTGAGAAAAAGCTATTTGCAATGGTACTTCCAGGATTCTGGATGGACATTGGCCAGCCGAGGGACTATATTTCTGGCCTGAGGCTTTACCTGGACTCATTGAGGAAGAAGTCATCTTCTAAGTTGGCCAGTGGGTCTCAAATTGTGGGGAATGTCATTGTGGATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCTATTGGTCCTGGCTGCATTATTGAGCAAGGTGTTAGACTCAAAAGCTGCACAATAATGCGAGGAGTGAGGGTTAAGAAGCATGCTTGTGTATCCAGCAGTATTATTGGGTGGCATTCCACTGTTGGTCAATGGTCTCGAGTGGATAATATGACCATCCTGGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATCAAATCAAATATTCTGAAGCCAGAGATTGTCATGTGA 1314 0.4391 MKANQGLIVKSVLIEDALRSIFLEGDGGEGFGDCSSWIHSFYLWIPTRLVDSVRVGVDSARFFILADLKESKGHIKMKALILVGGFGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAIGVTEVVLAINYQPEVMLNFLKDFETKLGIKITCSQETEPLGTAGPLALARDKLIDNSGEPFFVLNSDVISEYPLKEMIEFHKGHGGEASIMVTKVDEPSKYGVVVMEDSTGQVDKFVEKPKLFVGNKINAGIYLLNPSVLNRIELRPTSIEKEVFPKIAAEKKLFAMVLPGFWMDIGQPRDYISGLRLYLDSLRKKSSSKLASGSQIVGNVIVDETAKIGEGCLIGPDVAIGPGCIIEQGVRLKSCTIMRGVRVKKHACVSSSIIGWHSTVGQWSRVDNMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00657 437 CDD M1P_guanylylT_B_like_N 77 310 IPR045233 GO:0004475|GO:0005525|GO:0009298
Phco3g00657 437 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 76 309 IPR029044 -
Phco3g00657 437 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 77 436 - -
Phco3g00657 437 Gene3D Hexapeptide repeat proteins 311 433 - -
Phco3g00657 437 FunFam mannose-1-phosphate guanyltransferase beta 77 308 - -
Phco3g00657 437 SUPERFAMILY Nucleotide-diphospho-sugar transferases 76 388 IPR029044 -
Phco3g00657 437 Pfam Nucleotidyl transferase 78 305 IPR005835 GO:0009058
Phco3g00657 437 Pfam Bacterial transferase hexapeptide (six repeats) 337 369 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00657 Phco-Chr3 5304784 5310987 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00657 3 5304784 5310987 Phco3g00657 3 5304784 5310987 ECH
Phco2g02709 2 56646463 56648399 Phco3g00657 3 5304784 5310987 PCT