Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02709 ATGAAGGCGCTGATTTTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTCAAGGCCATTGGAGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTTATGTTGAATTTCTTGAAGGAATTTGAGGCAAAACTTGGCATCAAAATCACTTGTTCTCAAGAAACTGAACCACTGGGTACTGCCGGCCCCTTGGCTCTTGCGAGGGATAAGCTGGTAGATGCCTCCGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTTAAAGAAATGATTGCATTCCACAAATCCCATGGAGGAGAGGCCTCCATAATGGTGACAAAGGTTGATGAGCCGTCAAAATATGGTGTGGTTGTAATGAACGAGACTACTGGACAGGTTGAGAAATTTGTAGAGAAACCGAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATCTACCTATTAAACCCCTCAGTTTTGGATCGAATTGAACTGAGACCCACTTCTATCGAGAAAGAGGTGTTTCCTAATATCGCAGCTGCGAAAAAGCTATATGCAATGGTCCTGCCAGGATTTTGGATGGACATCGGACAACCAAGGGACTATATTTCTGGGCTGACACTTTACCTGGACTCATTGAGGAAAAACTCCCCTTCTAAACTGGCCAGTGGTCCACACATTGTGGGAAACGTCATTGTGCACGAAACTGCCAATATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTCATTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCACTCTTGCATATCCAGCAGTATCATTGGATGGCATTCAACCGTAGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTACAGCAATGGTGGTGTAGTTTTACCCCACAAGGAGATCAAGTCAAACATTCTGAAGCCAGAGATAGTCATGTGA 1086 0.4484 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVNEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLVDASGEPFFVLNSDVISEYPLKEMIAFHKSHGGEASIMVTKVDEPSKYGVVVMNETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPNIAAAKKLYAMVLPGFWMDIGQPRDYISGLTLYLDSLRKNSPSKLASGPHIVGNVIVHETANIGEGCLIGPDVAIGPGCVIESGVRLSRCTVMRGVRIKKHSCISSSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02709 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 360 - -
Phco2g02709 361 FunFam mannose-1-phosphate guanyltransferase beta 1 232 - -
Phco2g02709 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 231 IPR029044 -
Phco2g02709 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Phco2g02709 361 Gene3D Hexapeptide repeat proteins 238 358 - -
Phco2g02709 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058
Phco2g02709 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Phco2g02709 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02709 Phco-Chr2 56646463 56648399 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02709 2 56646463 56648399 Phco2g02709 2 56646463 56648399 ECH
Phco2g02709 2 56646463 56648399 Phco3g00657 3 5304784 5310987 PCT