Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00649 ATGGCAGGAATATGTTGCGGCGTTGTTGGAGAGGCCGGAGAGACTGCTTCTCCGACCAAACCTACCTCGCGCCCTTTCTCTCGCCGAAGTTTGGACCAACTGCCTTTAAAATACATCGCCGGCGTGGCAATCCCGGCGCCGGAGAACCCTCGGAAGCGCCAGAAGCTAGATCAGCGCGCTTCTCCGGCGCGGGAGTGTAAAAACGCGGTTCAGAGTTCTGCATCGAAGGGAGTCGAGGCTGTCTCGCTCCCGAATAGTTCGAAGGTTCCTGCGTTGGACTCGACAATTGTTGTCGTCGAGGAGGAGTGTCCGAGGTATGGGGTAACCTCGGTTTGTGGCAGGAGGAGGGACATGGAAGATGCCGTTTCAGTGCATCCTTCGTTTTGTCTTGAAAATCGAGATGAAGATCATCAGAAAGGGTTTCATTTCTTCGCTGTTTTTGACGGCCACGGATGTTCACACGTGGCGAGTATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAGGAGATTCAAAAAGCGAAAGAGAATTTGGAATGGGAATCGATGATGAAGAAGAGTTTTGCTCGAATGGACCAAGAGGTGCAAAGTTGGAGCAGAACCAACGAGACACGCACATGCAGGTGCGAGCTTCAGACACCGCGCTGCGACGCCGTCGGCTCCACCGCGGTCGTCGCCGTCGTCACGCCGGAAAAGATAATCGTGGCCAACTGCGGCGACTCGCGCGCCGTGCTCTGCCGGAACCGCGCACCCGTCCCACTCTCGGAGGATCACAAGCCGGATCGACCCGACGAGTTGCTTCGGATCGAAGATGCTGGTGGGCGCGTGATATATTGGGACGGGCCTAGAGTGCTTGGGGTCTTGGCCATGTCAAGAGCCATAGGGGACAACTATCTGAAGCCGTTTGTAATTTCGGAACCGGAGGTAACGGTAACGGAGCGGAGTGAGGAGGATGAGTGTTTGATACTAGGGAGTGACGGGCTTTGGGACACGGTTCAAAACGACACCGCGTGTAAGGTGGCCCGGATGTGTCTGAACGGCCAGAAGGCGGCGTCTCCGGGGAGTGAGTTGGCGGTGGAGTGTTCCGACAAGGCGTGCTCCGACGCCTCCATTCTGCTGACTAAGTTGGCGTTGGTGAGGCACAGTTCCGACAATGTGAGCGTAGTGGTGGTTGATTTGAGGAGAGATGATGGTGAACAATAA 1203 0.5578 MAGICCGVVGEAGETASPTKPTSRPFSRRSLDQLPLKYIAGVAIPAPENPRKRQKLDQRASPARECKNAVQSSASKGVEAVSLPNSSKVPALDSTIVVVEEECPRYGVTSVCGRRRDMEDAVSVHPSFCLENRDEDHQKGFHFFAVFDGHGCSHVASMCKERLHEIVKEEIQKAKENLEWESMMKKSFARMDQEVQSWSRTNETRTCRCELQTPRCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNRAPVPLSEDHKPDRPDELLRIEDAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPFVISEPEVTVTERSEEDECLILGSDGLWDTVQNDTACKVARMCLNGQKAASPGSELAVECSDKACSDASILLTKLALVRHSSDNVSVVVVDLRRDDGEQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00649 400 CDD PP2Cc 105 368 IPR001932 -
Phco3g00649 400 MobiDBLite consensus disorder prediction 42 66 - -
Phco3g00649 400 MobiDBLite consensus disorder prediction 11 30 - -
Phco3g00649 400 FunFam Protein phosphatase 2C 37 100 400 - -
Phco3g00649 400 SUPERFAMILY PP2C-like 95 394 IPR036457 -
Phco3g00649 400 Gene3D - 93 397 IPR036457 -
Phco3g00649 400 ProSiteProfiles PPM-type phosphatase domain profile. 105 393 IPR001932 -
Phco3g00649 400 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Phco3g00649 400 Pfam Protein phosphatase 2C 105 367 IPR001932 -
Phco3g00649 400 SMART PP2C_4 95 391 IPR001932 -
Phco3g00649 400 PANTHER PROTEIN PHOSPHATASE 71 393 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00649 Phco-Chr3 5269555 5271181 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02700 2 56581499 56583074 Phco3g00649 3 5269555 5271181 ECH
Phco3g00649 3 5269555 5271181 Phco3g00649 3 5269555 5271181 ECH
Phco2g02700 2 56581499 56583074 Phco3g00649 3 5269555 5271181 PCT