Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02700 ATGGCTGGGATTTGCTGTAGAGTTGTAGGAGAAGGTGACACCCCTACCCCTCTTGATTCCTCTCGTCCTTCCACCACCCGCAGAACTATGGACGTCGTACCCTTCAAGTACATGGCTGACATGACCGTGCCCGAGTCTTCTCGGAAGCGCCCCAAGCTCGATCTTAATGGCACTGATGATCAACTTCAAAATGACCTGGAATCCTCCGGAACCAAGGTTATGAAGAAGGATTCCCAATTCGTCAAGGAGGACGACGAAGACGTTTCCGACATTAAATCCCTGTCGGACGATGACTCCTCCGAAGATGAAGAGTGTCCCAAGTATGGGGTCACCTCTGTCTGCGGCAGGAGGAGAGACATGGAGGATTCCGTTGCCCTGCGCCCTTTCTTCTCGCTTGATGGCTTTCACTACTTTGGCGTTTTTGACGGTCATGGTTGCTCTCATGTTGCCACCATGTGCAAGGAGCGACTACATGAGATTGTGAACGAAGAGATTCTCGACGAGGACGATAATTTTGAGTGGAAATTGTTGATGCAGAGCGGTTTCGCTCGCATGGACGAAGAGGTTTTCCGCCGGAGCCAGGGCAACCAGACTTTCAACTGCAGGTGCGAGCTCCAGACTCCGCACTGCGACGCAGTTGGATCCACTGCTGTCATCGCCGTCCTCACCCCGGACAAAATTGTCGTCTCCAACTGCGGTGATTCCCGTGCTGTCCTCTGCCGTAACGGAGTTGCCATCCCTCTCTCTTCTGATCACAAGCCTGATCGCCCCGACGAATTGCTCCGAGTGGAATCCAAGGGAGGGCGCGTGATTTACTGGGACGGCCCAAGAGTGCTGGGTGTGTTGGCCATGTCTCGAGCCATAGGAGACTACTACCTGAAACCGTTCGTGATTTCGGAGCCCGAGGTGACTGTGACAGAGCGAAGTGATGGAGACGAGTGTTTGATACTGGCAAGTGATGGACTGTGGGATGTGGTGTCAAACGAAACTGCTTGTGGGGTGGTGAAGATGTGTCTGAAGTCCCAGAAGCCTCCGACTCCCCCGGGGTCTCCCGGTGGTTATGTGACAGCTGATGGATCCGACCGTGCTTGCTCGGATGCCTCAATTCTGTTGACAAAGTTGGCTTTGGCGAGGCACAGTGCGGATAATGTGAGCGTGGTGGTGATTGATTTGAGGAAGGATCAAGGACAAACTTCGGTTCCCACTTCCAACTACGTTAACGAATGA 1227 0.5346 MAGICCRVVGEGDTPTPLDSSRPSTTRRTMDVVPFKYMADMTVPESSRKRPKLDLNGTDDQLQNDLESSGTKVMKKDSQFVKEDDEDVSDIKSLSDDDSSEDEECPKYGVTSVCGRRRDMEDSVALRPFFSLDGFHYFGVFDGHGCSHVATMCKERLHEIVNEEILDEDDNFEWKLLMQSGFARMDEEVFRRSQGNQTFNCRCELQTPHCDAVGSTAVIAVLTPDKIVVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVESKGGRVIYWDGPRVLGVLAMSRAIGDYYLKPFVISEPEVTVTERSDGDECLILASDGLWDVVSNETACGVVKMCLKSQKPPTPPGSPGGYVTADGSDRACSDASILLTKLALARHSADNVSVVVIDLRKDQGQTSVPTSNYVNE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02700 408 CDD PP2Cc 107 391 IPR001932 -
Phco2g02700 408 Pfam Protein phosphatase 2C 107 383 IPR001932 -
Phco2g02700 408 FunFam Probable protein phosphatase 2C 9 101 395 - -
Phco2g02700 408 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Phco2g02700 408 ProSiteProfiles PPM-type phosphatase domain profile. 107 391 IPR001932 -
Phco2g02700 408 PANTHER PROTEIN PHOSPHATASE 86 391 IPR015655 GO:0004722|GO:0006470
Phco2g02700 408 MobiDBLite consensus disorder prediction 9 106 - -
Phco2g02700 408 SUPERFAMILY PP2C-like 107 392 IPR036457 -
Phco2g02700 408 Gene3D - 102 399 IPR036457 -
Phco2g02700 408 MobiDBLite consensus disorder prediction 70 95 - -
Phco2g02700 408 SMART PP2C_4 95 389 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02700 Phco-Chr2 56581499 56583074 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02700 2 56581499 56583074 Phco3g00649 3 5269555 5271181 ECH
Phco2g02700 2 56581499 56583074 Phco2g02700 2 56581499 56583074 ECH
Phco2g02700 2 56581499 56583074 Phco3g00649 3 5269555 5271181 PCT