Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00644 ATGGCCAACCGTTGGTGGACCGGGAACGTGGCGGTGAGACCCAATGAGCCCAACTCACCGCTTCAACCGCGAGACCAAGACAACGGCGACAACGCTAACAACGCCACTCCAACCAACAGCGGCAACAGTAACACCAACGTCAACGCTGGCGAGGATGACGACAACCCCGCAAACAACAACGACGGCGACGAGCAGAACCTTAGCAGCGGGCGGCGGCCGAGGGGCAGGCCGCCGGGGTCGAAGAACAAGCCAAAGCCGCCGGTGGTGATAACGAAGGAGAGCCCTAACGCGCTGCGCAGCCACATCCTCGAAATCAGCGGCGGCAGCGACGTGGCGGAGTGCATTGCTACCTTCGCCACGCGCCGCCACCGCGGCGTGTCTGTGCTCAGCGGCAACGGCGTCGTCACAAACGTCACGCTGCGCCAGCCCGCCGCGCCCGGCGGCGTCATCACGCTGCAGGGAAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTCTGCCAGCGCCTTCACCGCCGGAGGCCACCGGAATAACCGTGTACCTCGCCGGCGGGCAGGGGCAAGTCGTCGGCGGAAGCGTGGTGGGCCCCCTGATCGCCTCGGGACCCGTGATGGTGGTGGCAGCCACCTTCGCTAATGCTACCTATGAGAGGTTGCCCCTGGGGGAGGAACAAGGCGAAGAGGACATGCAAGAGGTGAATGAAGGTGGGGGGGGTGGAACACCACCACCTTCTCAGGGTGATCAACAGCCACAAGTTCCAATGCCGGTGTATAATTTGGTGCCTAACAGTGGTGACGTGTTCTGGGGTCCTCCACCTCGCCCTCCTCCTCCACCTTCTAATTATTGA 846 0.6312 MANRWWTGNVAVRPNEPNSPLQPRDQDNGDNANNATPTNSGNSNTNVNAGEDDDNPANNNDGDEQNLSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISGGSDVAECIATFATRRHRGVSVLSGNGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGITVYLAGGQGQVVGGSVVGPLIASGPVMVVAATFANATYERLPLGEEQGEEDMQEVNEGGGGGTPPPSQGDQQPQVPMPVYNLVPNSGDVFWGPPPRPPPPPSNY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00644 281 CDD DUF296 99 182 IPR005175 -
Phco3g00644 281 FunFam AT-hook motif nuclear-localized protein 98 226 - -
Phco3g00644 281 MobiDBLite consensus disorder prediction 12 66 - -
Phco3g00644 281 ProSiteProfiles PPC domain profile profile. 95 232 IPR005175 -
Phco3g00644 281 MobiDBLite consensus disorder prediction 242 256 - -
Phco3g00644 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Phco3g00644 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 269 IPR014476 GO:0003680
Phco3g00644 281 MobiDBLite consensus disorder prediction 226 281 - -
Phco3g00644 281 Gene3D - 98 230 - -
Phco3g00644 281 MobiDBLite consensus disorder prediction 1 92 - -
Phco3g00644 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 223 - -
Phco3g00644 281 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00644 Phco-Chr3 5216747 5217592 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02686 2 56487527 56488390 Phco3g00644 3 5216747 5217592 PCT