Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02686 ATGGCCAATCGCTGGTGGGCTGGGAATGTGGGAATGATTAGAGAGCAAGAGTTGATGGAGAACAATAACAACGCGAATACTACTCCGACTAATAGCAGCAACAGCAACACGAACGCCAACACCAACACGACGGAGGAAGAGGTCAGCAGGGACAACGGAGACGACCAGAATCAGAACCTCGGAAGCCATGAAGGTTCGGAGCCCGGAAGCGGTGGTCGGAGACCACGTGGAAGGCCTCCCGGGTCCAAGAACAAGCCCAAGCCGCCGATTGTCATAACCAAAGAAAGCCCCAACGCGCTCCGAAGTCACGTGTTGGAAATCGCCAGCGGCAGCGACGTCGCAGAGAGCATCGCCGCCTTTGCCAACCGCCGCCACCGAGGCGTGTCGGTCCTCAGCGGCAGCGGCATTGTCACCAACGTCACTCTCCGACAACCCGCCGCTCCCGCCGGAGTCATCACCCTCCACGGAAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTTTGCCCTCCCCTTCGCCTCCCGGTGCCACCGGACTCTCCGTCTACTTGGCCGGAGGGCAGGGGCAGGTTGTTGGCGGCACCGTTGCGGGTTCTTTGGTTGCCTCCGGGCCGGTGATGGTGATCGCCGCCACATTCGCCAATGCTACTTATGAGAGACTGCCGCTGGAGGATGAACAAGGTGAAGAGGAAATGCAAGTGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAATCTCAGGGTTTAGGTGAACAAGTTTCAATGGCCATGTATAATTTGCCTCCTAATTTGCTACACAATGGTCAGAACATGCCTCATGATGTATATTGGGGAGCTGCTCCACCTCGTCCCCCACCCTCCTTCTGA 864 0.5775 MANRWWAGNVGMIREQELMENNNNANTTPTNSSNSNTNANTNTTEEEVSRDNGDDQNQNLGSHEGSEPGSGGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEIASGSDVAESIAAFANRRHRGVSVLSGSGIVTNVTLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPPGATGLSVYLAGGQGQVVGGTVAGSLVASGPVMVIAATFANATYERLPLEDEQGEEEMQVQQQQQQQQQQQSQGLGEQVSMAMYNLPPNLLHNGQNMPHDVYWGAAPPRPPPSF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02686 287 ProSiteProfiles PPC domain profile profile. 97 234 IPR005175 -
Phco2g02686 287 MobiDBLite consensus disorder prediction 224 250 - -
Phco2g02686 287 MobiDBLite consensus disorder prediction 22 46 - -
Phco2g02686 287 MobiDBLite consensus disorder prediction 22 94 - -
Phco2g02686 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 225 - -
Phco2g02686 287 Gene3D - 100 242 - -
Phco2g02686 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 278 IPR014476 GO:0003680
Phco2g02686 287 FunFam AT-hook motif nuclear-localized protein 100 228 - -
Phco2g02686 287 CDD DUF296 101 212 IPR005175 -
Phco2g02686 287 MobiDBLite consensus disorder prediction 231 250 - -
Phco2g02686 287 PIRSF ESCAROLA 11 286 IPR014476 GO:0003680
Phco2g02686 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 213 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02686 Phco-Chr2 56487527 56488390 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02686 2 56487527 56488390 Phco2g02686 2 56487527 56488390 ECH
Phco2g02686 2 56487527 56488390 Phco3g00644 3 5216747 5217592 PCT