Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00276 ATGGAACAACCAAAACACCAACTTTTTCTGATTCTAACTCTTCTTTTATCAATAGTCACGGTTGAATCTGAATACCTTCGCCCTCTTCCTCGTAAAGCCTTAACTGTCCCATGGTATTCAATTTCCAAGGCCCATTCCTCTGATCCTCAACAGGTACATATTTCTTTGGCAGGAGAAAAGCACATCAGAGTTACCTGGATAACCGATGATAAACGTTCACCCTCATATGTAGAATACGGAACTTTACCTGGGAGATATGACTCAATTGCTGAAGGAGAGTTCACCTCTTATAACTACATCTTATATAGCTCAGGAAAGATACACCATGTTGTAATTGGACCTTTGGAAGACAATACTGTGTACTTTTACCGGTGTGGGGGAAAAGGTCCTGAGTTCCAGCTCAAAACCCCTCCAAACCAATTTCCAATTGTTTTTGCTGTGGCTGGTGATCTTGGTCAAACTGGCTGGACTAAATCAACATTGGCTCACATTGACCAGTGTCAATATGATGTCTACCTGCTTCCAGGAGACCTTTCATATGCTGATTGCATGCAGCATCTGTGGGACAGTTTTGGGGAACTGGTGGAGCCGCTTGCTAGTACAAGGCCATGGATGGTGACAGAGGGAAACCATGAAGAAGAGAACATACCCTTGTTAACGGACAAGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCAGGTGTTCACGTTATCATGCTTGGCTCCTACGCAGATTATGATATGCACTCTGACCAATATAGATGGCTAAAGGAAGATCTGTCAAAGGTAGATAGGGAAAGGACACCTTGGTTGTTTGTGTCATTTCATGTACCGTGGTATAATAGTAACAAGGCCCATCAAGGTGCTGGGGATGATATGATGGCAGCTATGGAGCCGTTGCTTTATGCCGCTAGTGTTGATTTAGTTATTGCTGGTCATGTTCACGCTTATGAACGTTCGAAACGTGTGTATGATGGAAGATTGGATCCCTGTGGTGCCGTCCATATAACTATAGGTGATGGAGGAAACAGGGAAGGCTTAGCTCGGAAGTATATAAACCCACAGCCAAAGTGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCCACTCATGCCCTCTGGAGTTGGCACAGGAACGATGATGACAATTCAGTAAAAGTTGATGATATCTGGATAAACTCTTTGGTCAGCTCAGGATGCGTTGATCAGAAGACACGTGAACTCTGA 1299 0.4326 MEQPKHQLFLILTLLLSIVTVESEYLRPLPRKALTVPWYSISKAHSSDPQQVHISLAGEKHIRVTWITDDKRSPSYVEYGTLPGRYDSIAEGEFTSYNYILYSSGKIHHVVIGPLEDNTVYFYRCGGKGPEFQLKTPPNQFPIVFAVAGDLGQTGWTKSTLAHIDQCQYDVYLLPGDLSYADCMQHLWDSFGELVEPLASTRPWMVTEGNHEEENIPLLTDKFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYADYDMHSDQYRWLKEDLSKVDRERTPWLFVSFHVPWYNSNKAHQGAGDDMMAAMEPLLYAASVDLVIAGHVHAYERSKRVYDGRLDPCGAVHITIGDGGNREGLARKYINPQPKWSEFREASFGHGELKIVNSTHALWSWHRNDDDNSVKVDDIWINSLVSSGCVDQKTREL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00276 432 CDD MPP_PAPs 140 418 IPR041792 -
Phco3g00276 432 Gene3D - 48 139 - -
Phco3g00276 432 Gene3D - 140 427 IPR029052 -
Phco3g00276 432 Pfam Purple acid Phosphatase, N-terminal domain 49 129 IPR015914 GO:0003993|GO:0046872
Phco3g00276 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 42 138 IPR008963 GO:0003993|GO:0046872
Phco3g00276 432 PANTHER ACID PHOSPHATASE RELATED 13 417 IPR039331 GO:0003993
Phco3g00276 432 Pfam Calcineurin-like phosphoesterase 145 334 IPR004843 GO:0016787
Phco3g00276 432 Pfam Iron/zinc purple acid phosphatase-like protein C 350 409 IPR025733 -
Phco3g00276 432 SUPERFAMILY Metallo-dependent phosphatases 142 412 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00276 Phco-Chr3 1976867 1979566 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00276 3 1976867 1979566 Phco3g00276 3 1976867 1979566 ECH
Phco11g02046 11 16955462 16960552 Phco3g00276 3 1976867 1979566 PCT