Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02046 ATGCCATGTAGAGAGATCCATTCAAAGTTAATTCGTGAAGTACATTGTTGTCGTGCTGATCCAACGTTGTTGGCAGAGGTTTGTGTTGATACACAAATGGAACTGAAACTACTTCTAACGGTTTTATTGATTCAGTCTGCAACTGTGCCTGCTGATTACATTCGACCTCCGCCTCGAAAAGCCTTTCATCTTCCATGGCATTCTAAACCCTCCTCTTACCCTCAACAGGTACACATTTCTTTAGCAGGAGACCAGCACATGAGAGTTACTTGGATTACTGATGATAATTCTGCACCTTCAATTGTAGAATATGGAACCTCACCAGGGCAATATGACTCTGTAGCTGAAGGAGAGAACACCTCTTACAGTTATATGTTCTATAACTCAGGAAAGATACACCACACCGTTATTGGACCTTTGGAGCATGATTTTGAGTACTACTATCGATGCGGTCAACAAGGTCCCGAGTTCCAGCTCAGAACTCCTCCAGCTCAACTTCCAATCACTTTTGCTGTGGCTGGGGATTTGGGTCAAACTGGATGGACTAAATCAACATTGGATCACATTGACCAATGTAAATATAATGTTCATCTACTTCCAGGAGACCTTGCATATGCTGATTATATCCAGCGTCACTGGGACTCGTTTGGTAGGCTAGTGCAGCCACTTGCTAGCGCAAGACCATGGATGGTAACACAAGGGAACCATGAAGTAGAGAGCATACCTTTGTTAAAGGATGGGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGCGGATCAAATTCAAATCTCTTTTATTCATTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGGTCCTATGCAGATTATGATGAGTACTCTGAACAATATAGATGGCTTAAGGAAGATCTTTCAAAGGTGGACAGGAAAAGAACACCTTGGTTACTTGTGTTATTTCATGTGCCCTGGTATAATAGTAACACAGCTCATCAAGGTGAAGGGGCTGATATGATGGCAGCTATGGAGCCATTGCTTAATGCTGCTAGCGTGGATTTAGTTCTCGCAGGTCATGTGCATGCTTATGAACGCTCGAAACGTGTATACAATGGAAGAGTTGACCCTTGTGGTTCAGTCCACATAACCATTGGTGATGGAGGAAACAAAGAAGGCTTAGCTCATAAATATATAAATCCCCAGCCAATATGGTCAGAATTCCGTGAAGCCAGTTTTGGTCACGGCGAGCTAAAGATTGTAAATTCTACTCATGCTTTCTGGAGTTGGCACAGGAATGACGATGATGAGCCAGTAAAATCTGATGATATCTGGATAACCTCTTTGATCAGCTCAGGATGTGTTGATCAGAAGAGAAATGAGCTTAGGAATAAACTTATGACACCTTAA 1395 0.4222 MPCREIHSKLIREVHCCRADPTLLAEVCVDTQMELKLLLTVLLIQSATVPADYIRPPPRKAFHLPWHSKPSSYPQQVHISLAGDQHMRVTWITDDNSAPSIVEYGTSPGQYDSVAEGENTSYSYMFYNSGKIHHTVIGPLEHDFEYYYRCGQQGPEFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLAYADYIQRHWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFVSYNSRWKMPFEESGSNSNLFYSFEVAGVHIIMLGSYADYDEYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNTAHQGEGADMMAAMEPLLNAASVDLVLAGHVHAYERSKRVYNGRVDPCGSVHITIGDGGNKEGLAHKYINPQPIWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLISSGCVDQKRNELRNKLMTP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02046 464 CDD MPP_PAPs 167 443 IPR041792 -
Phco11g02046 464 Pfam Purple acid Phosphatase, N-terminal domain 74 155 IPR015914 GO:0003993|GO:0046872
Phco11g02046 464 SUPERFAMILY Purple acid phosphatase, N-terminal domain 60 163 IPR008963 GO:0003993|GO:0046872
Phco11g02046 464 Pfam Calcineurin-like phosphoesterase 169 359 IPR004843 GO:0016787
Phco11g02046 464 PANTHER ACID PHOSPHATASE RELATED 39 442 IPR039331 GO:0003993
Phco11g02046 464 Gene3D - 165 451 IPR029052 -
Phco11g02046 464 SUPERFAMILY Metallo-dependent phosphatases 167 434 IPR029052 -
Phco11g02046 464 Pfam Iron/zinc purple acid phosphatase-like protein C 376 431 IPR025733 -
Phco11g02046 464 Gene3D - 73 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02046 Phco-Chr11 16955462 16960552 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02046 11 16955462 16960552 Phco11g02046 11 16955462 16960552 ECH
Phco11g02046 11 16955462 16960552 Phco3g00276 3 1976867 1979566 PCT