Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00271 ATGCCCATTATCAACACTTCTCTCACTATCACCAACTGGTTTTCTGAAATGGTAGAAACAGGAGCTGCAAGTTTTAAGCAACTTTGCATTGGCGGTTCTGTAGTTGAACTATTCGTGAAGGTTGTGGAGAGAGTTGTTTTTGCTTTATTTACTTGCATTCTGGCACTTGGTGGGTCAATAGTCGGAACAATTGCAGGAGGCATAAAGGGGCAGACCACAGAAACTGGTTTTCTTGATGGGGCTGGCAAAGGAGCAATCACAGGAGCCATTGCAGCATTGGAATTGATCAATTTTGATGCTGTTGATGAGCCATTGTCCAAGTTTGCCCTGTTGAGAAGTTTGTTAAATGGGAAAGTCTTTATGGAATGGATATGTCCAGCTGTGGCAAAACTCTATCAGTTGCATGTAACAATCAACACACTGGAAACAATTTACCAAGAAGTATCAGACATTTATGATATCAGGGGAGTTAGAGGAGTACCCCAGAATGTAATTATGAAGCTTCCTTTTCAGCCATTCAACTCTAGCAAAATCTCCAAATTATACAACATGTCTTGCTGCTCAATTTGCTTCCAGGATTTTGAGGATGGAGAATTGGTGAGGGTACTTCCAAAATGTGGCCACCTTTTTCACTTAGAATGCATAGACAAATGGCTAGTCCAACAAGGATCATGCCCAATGTGCAGAACTTATGTTCCAGACTACATTCTTAAATAA 717 0.4086 MPIINTSLTITNWFSEMVETGAASFKQLCIGGSVVELFVKVVERVVFALFTCILALGGSIVGTIAGGIKGQTTETGFLDGAGKGAITGAIAALELINFDAVDEPLSKFALLRSLLNGKVFMEWICPAVAKLYQLHVTINTLETIYQEVSDIYDIRGVRGVPQNVIMKLPFQPFNSSKISKLYNMSCCSICFQDFEDGELVRVLPKCGHLFHLECIDKWLVQQGSCPMCRTYVPDYILK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00271 238 Pfam Ring finger domain 187 229 IPR001841 -
Phco3g00271 238 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 38 230 IPR044523 -
Phco3g00271 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 235 IPR013083 -
Phco3g00271 238 ProSiteProfiles Zinc finger RING-type profile. 187 229 IPR001841 -
Phco3g00271 238 CDD RING-H2_EL5-like 186 229 - -
Phco3g00271 238 SMART ring_2 187 228 IPR001841 -
Phco3g00271 238 SUPERFAMILY RING/U-box 186 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00271 Phco-Chr3 1932537 1934075 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02012 11 16502745 16505488 Phco3g00271 3 1932537 1934075 PCT