Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02012 ATGTCCCTGTTCCATCTACTCATTATGGGGCTTCAATCTTCACCAGTTTTCAACCCAAAAACTCTTGCATTTTACTCATCTTCTCACTTTCAATGTAACCCCATTTTCTCACCCTTTCCCTCAACTATGACCATCTCCTTTTCTGGAATCACTGAAGCCACAACAAGGTGTAAGGAACTTCTTTCCATCTGGCTTTTGGCTGGCAATGGCAGTTATGCACTTCATCAGTTCATGAAAGTTGTAAAGAGAGTTGTTTTTGCTGAATTTACTTGCATTCTGGCATTAGGAGGGTCCATAATGGGGGTAATTGCAGGAGCCATCTGTGGCCAGACTACAGAAGCTGGTTTTCTTGATGGTGCTTGCAAAGGAGCTGTGACAGGGGCAATTGCTGCACTAGAATTGCTAAATAATGCTGCAGTTGCTGAGCCTCTATCAAAGGTTGCCCTATTGAGGAGTTTGTTAAATGGAAAAGTATTTATGGAATGGATATGTCCAGTTGTTGCACAAGCCTATCAATGTCATATCAATGCACATGGAACAACTTACAGAGAAGAATCAGATATTTATAATGGCATTGTCAGGGGAATCACTGTCAAAGGGATGGCTTGGAATATCATCCAAGACCTTCCTGTTCAACAATTCAATTCCAGTAAAATGTTGAAACTATACAATGAATCATGCTGCTCTATTTGCTTCCTGGATTTTGAGGATGAAGAATTTGTGAGGACACTTCCAAACTGTGGCCACTTTTTTCACTTGGTGTGCATAGACAAATGGCTAGTTCAACAAGGATCATGCCCCAACTGTAGAATTAATTATGTTCCACATTTATGA 834 0.4065 MSLFHLLIMGLQSSPVFNPKTLAFYSSSHFQCNPIFSPFPSTMTISFSGITEATTRCKELLSIWLLAGNGSYALHQFMKVVKRVVFAEFTCILALGGSIMGVIAGAICGQTTEAGFLDGACKGAVTGAIAALELLNNAAVAEPLSKVALLRSLLNGKVFMEWICPVVAQAYQCHINAHGTTYREESDIYNGIVRGITVKGMAWNIIQDLPVQQFNSSKMLKLYNESCCSICFLDFEDEEFVRTLPNCGHFFHLVCIDKWLVQQGSCPNCRINYVPHL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02012 277 SUPERFAMILY RING/U-box 220 275 - -
Phco11g02012 277 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 76 270 IPR044523 -
Phco11g02012 277 CDD RING-H2_EL5-like 227 270 - -
Phco11g02012 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 275 IPR013083 -
Phco11g02012 277 ProSiteProfiles Zinc finger RING-type profile. 228 270 IPR001841 -
Phco11g02012 277 Pfam Ring finger domain 228 270 IPR001841 -
Phco11g02012 277 SMART ring_2 228 269 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02012 Phco-Chr11 16502745 16505488 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02012 11 16502745 16505488 Phco11g02012 11 16502745 16505488 ECH
Phco11g02012 11 16502745 16505488 Phco3g00271 3 1932537 1934075 PCT