Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00270 ATGGCGTCGTGGTGCGGTGTTCGGAGCTTCCAGATTCCAGCGATGGTAGGCGGCGCACTGCGGAATCGTGCTTCATTGGCCGCCGGAGTAGGGTGTCTGTCAGTGGGCGGCACCTCCTTCTGGCGTTCCTCTTTGTCACCCAACCGCTCTCTGCCATTCACATGCTTGAGCATATCTTCCGATGCTCGTGTTAAGGAAAGTGTTGAAACTGATGGAGCACCAGCGGCTCTGGGACCATATTCTCAAGCAATCAAATCCGAAAACCTTCTTTTCGTGTCTGGTGTTCTTGGCCTTGATCCCGAGACAGGGGAATTCGTATCTGATTATGTTGAGGATCAAACTGAACAGCTTCTCAAAAACATGGGGGAAATCCTTAAAGCTGGTGGTGCCGACTACTCCTCGGTCGTTAAGACAACAATTATGTTGGCTGACTTGAAGGACTTTCAGAAGGTCAATGCGATATATGCTAAATACTTCCCTTCACCTTACCCTGCTCGTTCTACTTACCAAGTAGCTGCCTTGCCGTTGGATGCCAAGATTGAAATTGAGTGCATAGCAACTCTATAA 567 0.4938 MASWCGVRSFQIPAMVGGALRNRASLAAGVGCLSVGGTSFWRSSLSPNRSLPFTCLSISSDARVKESVETDGAPAALGPYSQAIKSENLLFVSGVLGLDPETGEFVSDYVEDQTEQLLKNMGEILKAGGADYSSVVKTTIMLADLKDFQKVNAIYAKYFPSPYPARSTYQVAALPLDAKIEIECIATL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00270 188 CDD YjgF_YER057c_UK114_family 80 186 - -
Phco3g00270 188 Pfam Endoribonuclease L-PSP 73 187 IPR006175 -
Phco3g00270 188 NCBIfam Rid family detoxifying hydrolase 66 187 IPR006056 -
Phco3g00270 188 SUPERFAMILY YjgF-like 67 188 IPR035959 -
Phco3g00270 188 FunFam Reactive Intermediate Deaminase A, chloroplastic 62 188 - -
Phco3g00270 188 ProSitePatterns Uncharacterized protein family UPF0076 signature. 164 182 IPR019897 -
Phco3g00270 188 Gene3D - 63 188 IPR035959 -
Phco3g00270 188 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 67 187 IPR006175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00270 Phco-Chr3 1929985 1931567 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02014 11 16513147 16516110 Phco3g00270 3 1929985 1931567 PCT