Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02014 ATGGCGTCGTTTTACTCCGCAAGGACTTTCCACATTCCGGCGATGAACGGCGGCGCTTTTCGCCGGCAGGCATCCTGGGCCGCCGGAATTGGTGGAGCCACGGTGGCCGGCGCCGCACTATTGCGTTCGTGTTCGTCTAAGCGCTCTCTGCCATTCGCGTGCAGGAGCATCTCTAATGATACCCGAGTAAAGGAAGCTGTTCAGACTGAAAAGGCCCCAGCAGCATTGGGGCCATATTCTCAAGCAATAAAAGCCAACAACCTTCTGTTTGTGTCGGGTGTTCTTGGCCTTGTTCCCGAGACTGGAAAGTTCATCTCTGAAAATGTTGAAGATCAGACAGAGCAGGTTCTCAAAAATATGGGGGAGATACTAAAATCTGGGGGTGCTGGCTATTCATCAGTTGTCAAGACAACAATATTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTCACCTGCCCCTGCTCGATCAACCTATCAAGTTGCTGCCTTGCCAATGGATGCCAAGATTGAAATTGAGTGCATAGCAGCACTTTGA 564 0.4965 MASFYSARTFHIPAMNGGAFRRQASWAAGIGGATVAGAALLRSCSSKRSLPFACRSISNDTRVKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFISENVEDQTEQVLKNMGEILKSGGAGYSSVVKTTILLADLKDFKKVNEIYAKYFPSPAPARSTYQVAALPMDAKIEIECIAAL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02014 187 Pfam Endoribonuclease L-PSP 70 186 IPR006175 -
Phco11g02014 187 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 65 186 IPR006175 -
Phco11g02014 187 Gene3D - 61 187 IPR035959 -
Phco11g02014 187 NCBIfam Rid family detoxifying hydrolase 64 186 IPR006056 -
Phco11g02014 187 CDD YjgF_YER057c_UK114_family 79 185 - -
Phco11g02014 187 SUPERFAMILY YjgF-like 64 187 IPR035959 -
Phco11g02014 187 FunFam Reactive Intermediate Deaminase A, chloroplastic 61 187 - -
Phco11g02014 187 ProSitePatterns Uncharacterized protein family UPF0076 signature. 163 181 IPR019897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02014 Phco-Chr11 16513147 16516110 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02014 11 16513147 16516110 Phco11g02014 11 16513147 16516110 ECH
Phco11g02014 11 16513147 16516110 Phco3g00270 3 1929985 1931567 PCT