Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00263 ATGAGCGGAGTGGGGATTGATATTGGAAATGAGAATTGTGTTATTGCTGCAGTGAAGCAAGGTGGGGTTGATGTTTTGTTGAATGATGAATCCAAACGTGAAACCCCTGCTGTGGTTTGCTTTGGAGAGAAGCAAAGGTTTTTAGGGTCAGCTGGTGCTGCTTCTGCCATGATGCACCCCAAGTCCGCAATATCTCAAGTGAAGAGACTATTAGGCAGGAGATTTGCGGACCCTGATGTTCAAAATGAGTTGAAAAGGCTCCCTGTTGAAACCTCGGAAAGTGCAGATGGTGGCATTCTGATACACTTGAAATACTTGAAGGAGAGTCATGCTTTTACCCCGGTTCAAATAGTAGCAATGCTCTTTGCGCACTTGAAGACCATAGCTGAAAAAGGTTTTGGGACCACCGTTTCTGACTGTGTTATTGGGGTTCCATCGTACTTCACCAACTTGCAGAGACAAGATTATCTCAACGCAGCAGCAATTGTTGGGTTGAAGCCTTTGAGGTTGATCCATGATTGCACTGCAACTGCTCTTAGTTATGGAGTTTACAAAACAGATTTTGCTAGTGAAGCTCCTGTTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTCTCTATTGCAGCATTTCAGGCTGATCAAATGAAGATACTCTCACATGCTTATGACATGAGCTTAGGGGGAAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCTGCAAAATTTAATGAACAGTACAACATTGAAGTGTATTCTAATGCCAGGGCATGTAGGAGGCTGCGTGTAGCATGTGAGAAGTTGAAGAAGGTTTTGAGTGCAAATCTAGAGGCTGATCTGACTGTTGAGTGTTTGATGGATGAAAAAGATGTTAAAGGCTATATCAAGAGGGAAGAATTTGAGAATCTGGCATCAGGACTATTGGAGAGAATTTGTGTTCCTTGCAACAAAGCATTGGCTGATGCAACCTTGACGGTAGAAAATATTGATTCTGTTGAGGTAGTTGGTTCAGGTTCACGGATTCCAGCTATAACTAGAATATTAACTTCTCTATTTAAGAGAGAGCTCAGCCGCAGACTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTCCAGTGTGCAATGCTGAGTCCTGTTTTCCGTGTCAAAAAATATGAGGTCCAGGATTCTATTCCTTTTTCCATTGGACTTTCGTCTGATGGAAAGCCAATTCGTGCAGGATTGGATGGTGTACTCTTCCCAAAAGGCCAACCCATTCCAAGTATTAAATTTCTCACATTTCAGTACAGTGATTTGCTCCGTTTAGAAGCATTCTATGCCAATCCAGATGAATTACCACCCGGGACATCTCCTAAAATTTGTTGCTTCACAATTGGTCCTTTCCATGGATCCCATGCAAGTAAGGCAAGAATTGAAGTTCAAGTTCAACTAAATTTGCATGGCATTATTGGTATTGAATCAGTTATGTTGGTTGAGGATCATGTGGATGATTCTCGTTCAAATTCTGAAACAATCAATATTGAACCTGTTTCTGAGACAATTGAAAATGCCTCAGAAGATAGTATCAACGAAAAGTGTGAAGCTTCTCATCATTCTGCTGATGGTACAAGAAAAGATAAAGCTAACAGAAGGCTTCATGTACCAGTGAGTGAAAACATTTATGGTGCAATGACCAAGGCCGAGATATTGGAAGCTCAAGAAAAAGAACTCCTGTTAGCCGATCAGGACAGAACTATTGAGCTAATCAAGGACAGGAAGAATCTGTTGGAGTCTTATATTTATGAAACAAGGAGTAAGCTCTTCAGCACATATCTAAGCTTTTCGAGTGAACATGAGAGGAAGGACATATCGAGGAGCCTGAAAGAGACTGAGGAATGGCTTTATGATGATGATGGTGGTGATGAACCCGTAGATGCTTATTCTGCAAAACTAGCAGATCTAAAACAGCTGGTGGATCCAATCGAGTATAGATATAACGACAGAGAAGCAAGGCCACAAGCTACAAGAGATTTGTTAAGTTGCATTGTAGAGTATCGAATGTCAGCAGATTCTCTTCCACCCCAAGATAAAGAACTGGTCATAAATGAGTGCAATAAAGCAGAGAAGTGGTTAAGAGAGATGAGGCAACAACAAGATCTTTACCCTAAAAACATTGATCCAGTATTATTATCAATTGATATCGAGAGAAAGACAGAGGAGTTAAACTCAGTATGCCAACAGATATTGAAATCCAACGGTTCTCCAATTCCAAGAGACGACGGTGAAGACAAACAGAATACCCCATGA 2298 0.4121 MSGVGIDIGNENCVIAAVKQGGVDVLLNDESKRETPAVVCFGEKQRFLGSAGAASAMMHPKSAISQVKRLLGRRFADPDVQNELKRLPVETSESADGGILIHLKYLKESHAFTPVQIVAMLFAHLKTIAEKGFGTTVSDCVIGVPSYFTNLQRQDYLNAAAIVGLKPLRLIHDCTATALSYGVYKTDFASEAPVYVAFVDIGHCDTQVSIAAFQADQMKILSHAYDMSLGGRDFDEVLFSHFAAKFNEQYNIEVYSNARACRRLRVACEKLKKVLSANLEADLTVECLMDEKDVKGYIKREEFENLASGLLERICVPCNKALADATLTVENIDSVEVVGSGSRIPAITRILTSLFKRELSRRLNASECVARGCALQCAMLSPVFRVKKYEVQDSIPFSIGLSSDGKPIRAGLDGVLFPKGQPIPSIKFLTFQYSDLLRLEAFYANPDELPPGTSPKICCFTIGPFHGSHASKARIEVQVQLNLHGIIGIESVMLVEDHVDDSRSNSETINIEPVSETIENASEDSINEKCEASHHSADGTRKDKANRRLHVPVSENIYGAMTKAEILEAQEKELLLADQDRTIELIKDRKNLLESYIYETRSKLFSTYLSFSSEHERKDISRSLKETEEWLYDDDGGDEPVDAYSAKLADLKQLVDPIEYRYNDREARPQATRDLLSCIVEYRMSADSLPPQDKELVINECNKAEKWLREMRQQQDLYPKNIDPVLLSIDIERKTEELNSVCQQILKSNGSPIPRDDGEDKQNTP 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00263 765 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Phco3g00263 765 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 594 IPR029047 -
Phco3g00263 765 Gene3D - 186 360 - -
Phco3g00263 765 Pfam Hsp70 protein 4 662 IPR013126 GO:0005524|GO:0140662
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 363 383 - -
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 388 407 - -
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 332 348 - -
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 2 15 - -
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 472 488 - -
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 30 42 - -
Phco3g00263 765 PRINTS 70kDa heat shock protein signature 140 160 - -
Phco3g00263 765 MobiDBLite consensus disorder prediction 521 545 - -
Phco3g00263 765 FunFam Heat shock 70 kDa protein 4 38 113 - -
Phco3g00263 765 FunFam Heat shock 70 kDa protein 4 1 74 - -
Phco3g00263 765 SUPERFAMILY Actin-like ATPase domain 3 185 IPR043129 -
Phco3g00263 765 MobiDBLite consensus disorder prediction 522 545 - -
Phco3g00263 765 Gene3D - 38 113 - -
Phco3g00263 765 FunFam Heat shock 70 kDa protein 4 103 194 - -
Phco3g00263 765 MobiDBLite consensus disorder prediction 745 765 - -
Phco3g00263 765 Gene3D - 561 674 IPR029048 -
Phco3g00263 765 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 557 IPR029047 -
Phco3g00263 765 CDD HSPA4_like_NDB 2 381 - -
Phco3g00263 765 PANTHER HSC70CB, ISOFORM G-RELATED 1 752 - -
Phco3g00263 765 FunFam Heat shock 70 kDa protein 4 561 672 - -
Phco3g00263 765 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 564 661 IPR029048 -
Phco3g00263 765 Gene3D Actin; Chain A, domain 4 230 313 - -
Phco3g00263 765 Gene3D - 5 374 - -
Phco3g00263 765 FunFam Heat shock 70 kDa protein 4 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00263 Phco-Chr3 1892912 1897233 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02023 11 16628525 16633281 Phco3g00263 3 1892912 1897233 PCT