Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02023 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGTGTCATTGCTGTAGTTAGGGAACGTGGGATTGATGTTTTGTTGAATTATGAATCCAAACGCGAAACCCCAGCTGTGGTCTGCTTTAACGAGAAGCAGCGGCTTTTGGGGTCTGCTGGTGCTGCTTCGGCTATGATGCATATCAAATCCACTATATCTCAAATAAAGAGACTAATAGGAAGGAAATTTGCAGATCCTGATGTGGATAAAGAGCTGAAAATGCTCCCTCTTGAAACTTCTGAGAGTTCAGATGAAGGCATTTTGATTCACTTGAAGTACTTGGGGGAGATTCATGTATTTACACCTGTTCAAATAATGTCCATGCTTTTTGCTCACTTGAAGACTATGACTGAAAAAGATTTGGAGATGCCCATTTCGGATTGTGTTATTGGGATCCCATCATACTTTACGGACTTGCAGAGACGGGCATATCTTGATGCAGCGAAAATTGCGGGGTTGAAGCCTCTGAGATTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATGTATAAAACAGATTTTAGCAGTACAGGTCCAGTTTATGTTGCATTTATAGACGTTGGTCACTGTGACACACAGGTCTCTATTGTATCATTTCAGTTTGGGAAAATGAAGATACTTTCACAGGCATCTGATAGGAGCTTAGGGGGAAGGAACTTTGATGAAGTTATTTTTAGTCATTTTGCAGCAAAATTCAAGGAAGAGTACCATATTGATGTGTATTCTAATCCCAAGGCGTGCTTTAGGCTACGTGCAGCATGTGAGAAATTGAAGAAAGTTTTGAGTGCAAATCTAGAGGCACCTCTAAATATAGAGTGCTTGATGGATGAGAAGGATGTTAAGGGCCTTATCTCAAGGGAAGAATTTGAGAAGCTCGCATCAGGATTATTAGAGAGAGTTTCTATTCCTTGCCTCAGAGCATTAACGGATGCAAACTTGACAGCGGAGAAGATTTCTTCTGTAGAGCTAGTTGGTTCGGGTTCTAGGATTCCAGCTATAAGTACATTACTAATTTCCTTATTCAAGAGAGAACCCAGTCGACAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAGTGTGCAATGCTCAGTCCTGTTTACCGTGTGAGAGAATACGAGGTTCAGGATGTTATTCCCTTTTCAATTGGACTTTCATCAGATGAAGGCCCAATTGCCGTGATGTCAAATGGTGTACTTTTCCCAAAAGGCCAACCCTTTCCAAGTGTTAAAGTCATAGCCTTTCAGCGAAGTAATTTGTTTCATTTGGAAGCTTTCTATGTTAATCCAGAAGAACTACCACCTGGGACATCTCCTAAAATTAGTTGTGTCACGATTGGCCCTTTCTATGGATCCCATGGTAGTAAGAACAGAGTTAAAGTTAGAGTTTCACTTGATCTGCATGGAATTCTCAATATTGAATCAGCTACATTGATCAAGGATGACATGGATGATTTGGTTATGGCGGGTGATCATAATTCAAATTCTGATGCAATGGATATTGATCCCATTCCTGAGACAGTTACCAATGGGTTTGAAGACATTACCAATAAGAAGTTGGAATCTCCATATAGTTCTGTTGATGGTATAAGAAAAGATAAGGGTACCAGACGGGTTGATGTGCCAGTGAATGAGAATATCTATGGTGGAATGACAAAGGCAGCAATCTCAGAAGCTCGTGAAAAAGAACTCCAGTTGGCCCAACAGGACAGAATTATAGAGCAAACCAAAGAAAAGAAGAATAGTTTGGAGTCTTATGTCTATGATATGAGGAGTAAGCTCTTCCACACATATCGAAGCTTTGCGAGTGAACACGAGAGGGATGACATATCTAGGAGTCTTCAAGAGACTGAGGAATGGCTTTATGAGGATGGTGTTGATGAAACTGAGAGTGCTTATTCTTCAAAACTGGAAGATCTGAAAAAGCTGGTAGATCCAATTGAGAATCGTTTCAAAGATGAAAAAGAAAGAGTGCAAGCTAAAGAGGATTTGTCGAAGTTCATTTTAAAGCATCGCACATCTGCAGAATCCCTTCCACCCCAGGATAAAGAACTGATCATCAACGAGTGCAATAGAGCAGAGCAGTGGTTGAAAGAGAAGATCCAGCAACAAGAATCCTTTCCTAAGAATACTGACCCAGTATTATGGTCAAGTGATATTAAGAGCAAGACAGAAGAGTTTAACTTAACATGCCAACACATATTGGGATCCAAGACTTCTCCATCTCCAGAAGATAAAGACATGCCAGATTCGTTCAATGATCCATGA 2316 0.4076 MSVVGFDIGNENCVIAVVRERGIDVLLNYESKRETPAVVCFNEKQRLLGSAGAASAMMHIKSTISQIKRLIGRKFADPDVDKELKMLPLETSESSDEGILIHLKYLGEIHVFTPVQIMSMLFAHLKTMTEKDLEMPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGMYKTDFSSTGPVYVAFIDVGHCDTQVSIVSFQFGKMKILSQASDRSLGGRNFDEVIFSHFAAKFKEEYHIDVYSNPKACFRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGLISREEFEKLASGLLERVSIPCLRALTDANLTAEKISSVELVGSGSRIPAISTLLISLFKREPSRQLNASECVARGCALQCAMLSPVYRVREYEVQDVIPFSIGLSSDEGPIAVMSNGVLFPKGQPFPSVKVIAFQRSNLFHLEAFYVNPEELPPGTSPKISCVTIGPFYGSHGSKNRVKVRVSLDLHGILNIESATLIKDDMDDLVMAGDHNSNSDAMDIDPIPETVTNGFEDITNKKLESPYSSVDGIRKDKGTRRVDVPVNENIYGGMTKAAISEAREKELQLAQQDRIIEQTKEKKNSLESYVYDMRSKLFHTYRSFASEHERDDISRSLQETEEWLYEDGVDETESAYSSKLEDLKKLVDPIENRFKDEKERVQAKEDLSKFILKHRTSAESLPPQDKELIINECNRAEQWLKEKIQQQESFPKNTDPVLWSSDIKSKTEEFNLTCQHILGSKTSPSPEDKDMPDSFNDP 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 388 407 - -
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 472 488 - -
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Phco11g02023 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Phco11g02023 771 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Phco11g02023 771 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Phco11g02023 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 517 IPR029047 -
Phco11g02023 771 FunFam Heat shock 70 kDa protein 4 230 313 - -
Phco11g02023 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 571 666 IPR029048 -
Phco11g02023 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 760 - -
Phco11g02023 771 FunFam Heat shock 70 kDa protein 4 1 81 - -
Phco11g02023 771 FunFam Heat shock 70 kDa protein 16 isoform A 387 565 - -
Phco11g02023 771 MobiDBLite consensus disorder prediction 750 771 - -
Phco11g02023 771 Gene3D - 567 679 IPR029048 -
Phco11g02023 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Phco11g02023 771 Gene3D - 5 374 - -
Phco11g02023 771 FunFam Heat shock 70 kDa protein 4 38 113 - -
Phco11g02023 771 Gene3D - 38 113 - -
Phco11g02023 771 FunFam Heat shock 70 kDa protein 4 113 193 - -
Phco11g02023 771 Pfam Hsp70 protein 3 666 IPR013126 GO:0005524|GO:0140662
Phco11g02023 771 CDD HSPA4_like_NDB 2 381 - -
Phco11g02023 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 600 IPR029047 -
Phco11g02023 771 Gene3D - 186 360 - -
Phco11g02023 771 FunFam Heat shock 70 kDa protein 4 567 677 - -
Phco11g02023 771 Coils Coil 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02023 Phco-Chr11 16628525 16633281 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02023 11 16628525 16633281 Phco11g02023 11 16628525 16633281 ECH
Phco11g02023 11 16628525 16633281 Phco3g00263 3 1892912 1897233 PCT