Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00259 ATGGTTGAAGTGGGTATTTTTCAGATCACAGGTAACAGTTTCGACCCATTTGCTGAGGCTACAGATAGAGATGCCCCCGGGGCGAAGGAGTATGTGCATATCCGCATACAACAGAGGAATGGGAAGAAGAGTTTGACGACAGTGCAAGGGCTGAGGAAAGAGTTCAGCTATGAGAAGATCCTGAAAGACCTGAAGAAAGAGTTCTGCTGCAATGGCAATGTTGTGCATGACAAGGAGCTTGGAAAGATTATCCAACTTCAGGGTGATCAGCGCAAGAACGTTTCTCACTTCCTCATTCAGGCTGGCCTTGTTAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 345 0.4638 MVEVGIFQITGNSFDPFAEATDRDAPGAKEYVHIRIQQRNGKKSLTTVQGLRKEFSYEKILKDLKKEFCCNGNVVHDKELGKIIQLQGDQRKNVSHFLIQAGLVRKDQIKIHGF 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00259 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 12 114 - -
Phco3g00259 114 CDD eIF1_SUI1 30 113 IPR005874 GO:0003743
Phco3g00259 114 Gene3D - 5 114 - -
Phco3g00259 114 Pfam Translation initiation factor SUI1 29 102 IPR001950 GO:0003743|GO:0006413
Phco3g00259 114 SUPERFAMILY eIF1-like 9 114 IPR036877 GO:0003743|GO:0006413
Phco3g00259 114 PIRSF Transl_init_SUI1_Euk 3 114 IPR005874 GO:0003743
Phco3g00259 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
Phco3g00259 114 FunFam Eukaryotic translation initiation factor SUI1 4 114 - -
Phco3g00259 114 NCBIfam translation initiation factor SUI1 12 114 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00259 Phco-Chr3 1865396 1865740 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00259 3 1865396 1865740 Phco3g00259 3 1865396 1865740 ECH
Phco11g02010 11 16462419 16462757 Phco3g00259 3 1865396 1865740 PCT