Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g02010 ATGGTTGAGTTGGAAATCCAAGTCCCCACCCCATTCGACCCATTTGCTGAGGCTAGAGAATCGGATGCCCCCGGAGCGAAGGAGTATGTGCACATTCGGATCCAGCAGAGGAATGGGAAGAAGAGTCTGACCACAGTGCAGGGGCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAAGAGTTCTGCTGCAACGGCAATGTGGTGCAGGACAAGGAGCTTGGCAAGATAATTCAGCTCCAAGGTGACCAGCGCAAGAACGTCTCACACTTTTTGGTCCAGGCTGGCCTTGTCAGGAAGGACCAGATCAAGATTCATGGTTTTTGA 339 0.5162 MVELEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g02010 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Phco11g02010 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Phco11g02010 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Phco11g02010 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Phco11g02010 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Phco11g02010 112 Gene3D - 1 112 - -
Phco11g02010 112 NCBIfam translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Phco11g02010 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Phco11g02010 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g02010 Phco-Chr11 16462419 16462757 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g02010 11 16462419 16462757 Phco11g02010 11 16462419 16462757 ECH
Phco11g02010 11 16462419 16462757 Phco3g00259 3 1865396 1865740 PCT