Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00207 ATGGCTCCCATGGGAGACAATGTTGTTGTGTCCAACATGGAACTGGAGAGGATGCTCAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCGAGGTCGATGCTTCACCTTCTGAGAGAGACTCTGGACAGAGTTGAGCTTGTTGAGGGACGTGAGGTACCGTTTGTGGTGGTGGACTTGGGGTGTTCGTGTGGGAGCAACACCATAAACGTGGTGGATGTGATGATAAAGCACGTTATGAAACGGTACGAGGCATTGGGGTTGCAGCCACCAGAGTTCTCAGCTTTCTTCTCAGACCTTCCCAGCAATGACTTCAACACACTCTTTCAGCTCCTTCCTCCTCTTGCCAACCACGGCGTCAGCATGGAAGAATGCCTTGCCGCCAACAACCACCGCTCCTACTTCGCCGCCGGAGTCCCCGGTTCTTTCTACCGGAGGCTTTTCCCGGCGAGGTCTGTGGATGTTTTCCACTCAGCCTTCTCTTTGCACTGGCTTTCTCAGGTGCCAGAAAGTGTGGTGGAGAAGAGGTCAAGGGCATACAACAAAGGAAGGGTGTTTATCCATGGTGCTGATGAGAGCACAGCAAATGCTTACAAGAAACAATTTCAAACAGACTTGGCAGGCTTTCTGATGGCAAGGTCAGTGGAGATGAAGAGAGAGGGGTCCATGTTCCTAGTTTGCTTGGCCAGAACTTCAGTGGACCCCACAGACCAAGGTGGGGCAGGCCTTCTTTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGACTGATTAGCCACGAAAAAAGAGACAGTTTTAACATTCCAGTTTATGCAGCAAGCCTGCAAGACTTCAAGGATGTGGTTGAAGCGAATGGTTCATTTGCCATAGACAAGCTTGAAGTGTTCAAAGGAGGAAGTCCACTTGTGGTGAACCAACCAGATGATGCAAGTGAAGTAGGCAGAGCTCTAGCCAACAGCTGCAGGACCGTGTCAGGAGTCCTTGTTGATGCCCACATAGGTGACAAACTAAGTGAGGAACTTTTTCTTAGAGTGGAGCGTAGAGCCACTAGCCATGCCAAAGAGCTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCAATGA 1164 0.4991 MAPMGDNVVVSNMELERMLSMKGGKGEASYANNSQAQAIHARSMLHLLRETLDRVELVEGREVPFVVVDLGCSCGSNTINVVDVMIKHVMKRYEALGLQPPEFSAFFSDLPSNDFNTLFQLLPPLANHGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPESVVEKRSRAYNKGRVFIHGADESTANAYKKQFQTDLAGFLMARSVEMKREGSMFLVCLARTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISHEKRDSFNIPVYAASLQDFKDVVEANGSFAIDKLEVFKGGSPLVVNQPDDASEVGRALANSCRTVSGVLVDAHIGDKLSEELFLRVERRATSHAKELLEQLQFFHIVASLSFAQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00207 387 Pfam SAM dependent carboxyl methyltransferase 63 383 IPR005299 GO:0008168
Phco3g00207 387 Gene3D - 18 368 IPR042086 -
Phco3g00207 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 384 IPR029063 -
Phco3g00207 387 Gene3D Vaccinia Virus protein VP39 33 313 IPR029063 -
Phco3g00207 387 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 19 367 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00207 Phco-Chr3 1522686 1526293 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00207 3 1522686 1526293 Phco3g00207 3 1522686 1526293 ECH
Phco11g01942 11 15859592 15863483 Phco3g00207 3 1522686 1526293 PCT