Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01942 ATGGGAGATAATGTTGTTGTGTCCAACATGGAGCTTGAGAAATTGCTTAGCATGAAAGGAGGCAAAGGTGAAGGAAGCTATGCCAACAATTCCCAAGCTCAGGCCATCCATGCCAAGTCCATGCATCACCTGCTGAAAGAAGCCCTAGATGAAGTTCAACTTCAAGACCCTAACATCCCTTTTGTGGTTGTGGATTTGGGGTGTTCATGTGGCAGCAACACCATCAATGTGGTGGATGTGATCGTCAATCACATCATCAAACGCTATGAGGCCTCAGGATTAGAACCTCCTGAGTTTTCTGCTTTTTTCTCAGACCTTCCTGGCAATGACTTCAACACCCTCTTTCAGCTCCTTCCTCCATCAGCCAACTATGGAGCTAGCATGGAGGAGTGCCTTGCCGCCAGCAACCACCGTGCCTACTTCGCCGCCGGCGTTCCCGGCTCCTTCTACCGGAGGCTTTTTCCGGCAAGGTTCATTGATGTTTTCCACTCAACCTTTTCCTTGCATTGGTTATCTCAGGTACCAGAATGTGTGATGGACATGAAGTCAAGTGCATACAACAAGGGGAGGGTGTGCATCCATGGTGCTAGTGAGATCACAGCAAATGCTTACAGGAAACAATTCCGAGAAGACTTGGCTGGGTTCTTGGGCTCAAGGTCTGTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTGGGCAGAACTTCTGTGGACCCCACAGACCAAGGTGGGGCTGGCCTCCTATTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCAGTGAGAAAAGAGACAGTTTCAACATTCCAGTTTATGCACCAAGCCTGCAAGATGTCAAGGAGGTGGTTGAATCCGATGGTTCATTCGCCATAAACAAGCTTGAGGTGTTCAAAGGGGGAAGCCCTCTTGTGGTGAACCATCCATGTGATGATAAGGAAGTAGGAAAGGCCCTTGCCAACACATGCAGGAGTGTGTCTGGTGTCCTTGTTGAAGCTCACATTGGTGTCAAGCTCAGTGAGGAACTGTTTCTGAGAGTGGAACGTAGAGCCGCAAGCCATGGCAAAGAGTTATTAGAGAAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCTATGA 1152 0.4844 MGDNVVVSNMELEKLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDEVQLQDPNIPFVVVDLGCSCGSNTINVVDVIVNHIIKRYEASGLEPPEFSAFFSDLPGNDFNTLFQLLPPSANYGASMEECLAASNHRAYFAAGVPGSFYRRLFPARFIDVFHSTFSLHWLSQVPECVMDMKSSAYNKGRVCIHGASEITANAYRKQFREDLAGFLGSRSVELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISSEKRDSFNIPVYAPSLQDVKEVVESDGSFAINKLEVFKGGSPLVVNHPCDDKEVGKALANTCRSVSGVLVEAHIGVKLSEELFLRVERRAASHGKELLEKLQFFHIVASLSFAL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01942 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 361 IPR005299 GO:0008168
Phco11g01942 383 Gene3D - 16 362 IPR042086 -
Phco11g01942 383 Pfam SAM dependent carboxyl methyltransferase 51 379 IPR005299 GO:0008168
Phco11g01942 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Phco11g01942 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01942 Phco-Chr11 15859592 15863483 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01942 11 15859592 15863483 Phco11g01942 11 15859592 15863483 ECH
Phco11g01942 11 15859592 15863483 Phco3g00207 3 1522686 1526293 PCT