Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00199 ATGAAGAGGGGTAGGTCATCACATTCAGATGATGAAGATGAGTGTGAGTCTGAGGTTCAGTCAATCTCTGTGTCAAATTACCATCTTGTTGACGATGAGGACAATCCTGTGTCTTTTTCTGTATTGCCAATTCAATGGAATGATTCTGAGAACTGTGGTGGTTGCGAAGAAGGGAAGGTGTTTCTGGACGGGGATACCGATAGCGGGCTGTTGAAGATTTTCTTGCAAGTGACGGCGTGGAGATTTGATCTTTCCAAAGCGAGACCCGAGGTATTCTTGCTGGCAAAGGATGGAAGGTGGATAAAGATTGAGAAGCCTAGGAAGGCTTTTCAGGAAAAAATAAGGACCATTTTGATCACCCTTCATTTCCTCCGTAGTGTGAAGGGAAGACTACGTCAACTGTCTGTGGGATCTCTCTGGCAAGACTTGAGCAAGGATAGGGAGTTGAGCTCTTATGGGTTTAAGCCTTCACAAAATGATTTATCGGACCACGTGCTTTTGATTGGCAAAGCTTCCAAAAGGGATTCTGTCTTAGCTAAGTCCAAGCTTTTGCTCATGGTTTTGGAGAAACTGAAGAGGCAAAGTCTTCTTGATGAGGAAGTTAATGATTTTGAACAGCCTGGACTTCCAGTTGTTGAAATTGACAGTTATATGCTAGATAAATCTAATGAAGAGTCTGATGAAGAAATGGATGCTTTGGATGTTTGCGCATTTTGTGACAATGGTGGTAATGTTATATGTTGTGATGGCGTGTGCATGAGATCATTTCATGCTACAGAGGAGGCTGGTAGAGAAAATAGTTGTTTTTCTCTTGGTTTTACCCAGAAGGAAGTTGATGAGATCCAGAACTTTTATTGTAAGAATTGTGAATGTCGTCAGCACCAATGTTTTGCATGTGGCAAGCTGGGGTCTTCTGATAAAGTTATCGGTGCAGAGGTTTTTAAATGTGCTTCTGTAACCTGTGACCGTTTTTATCATCCACATTGTGTTGCAAAATTACTTCCCGATGTAGTCAAGCATGTCACAAAGGAATTTGAGAGAAATATTGCTGATGGGAATCCTTTTACTTGTCCCCTTCATTATTGTTGTGTCTGTAAAGGGTTGGAAAATATGATGGATCCTGAGTTGCAGTTTGCTGTTTGTAGGCGTTGTCCAAAGGCATATCATCGTAAATGTTTGCCAAGAGAAATTACTGCTGACAAAAGTGATACACTAAGGGCTTGGGAAGGTCTTCTACCAAAGAACCGCATTCTTATATATTGCTTAAATCATGAAATTGATCCTGAACTTGGGACTCCTGTAAGAGATCATATAAAATTCCCCAAAATGAAAGCTACTGCTCAAAAAATTGATACTACTACTATTGAGCAGAAAAAGCCTTCAACTAATAAGAGGGTTATGTTGAAGAAAAATATTGACTCAGATAGCTCAGCTGGCAAAAGCACTTCAAAAGGATCTAAATTGACTGCAAAACTGTCTTCTGACAAAGTTGGTGGCAAGAAGCCATCTAATAAGAAGATTTCCAGTTCAAATATGTCAAAAAAGCCAAAATCAAAAGAAACATCAAGGTGTTTGACTGAAAATAAGATGTCAATCTTGAAGAAATTTGAAATTCCTGACACTGAGAAAAAATATAACCAGCGAACAGAGAATGAGGGTTTGGAGCAAATTGAGCGTGACAATCAGATAAATAAGTTGAATACTAATTTCCTGTCTGTCAAGCCTATTGGAAAGTTGAGTATTGATTTGCCTCTACTGGATGCTGATTCGGAAAAGAGTTTGTTGGATTTATTTAAAGAAGCCAGTTCATCCATTACGTTGGAGAATGTCTTAGAAAAGCACACATTTGCTTCTACTCATAGTCACTCGATGAGAAGTGTGGTGGAGAAGACCATTACAACGGAGAAATTGGAAGATTCAGTTAATTCTGTTCGAACAGCTATAAGGATGCTCGAGAGTGGATGCAGCATTCAGGACGCTGAAGCTGTTTGTGACCCTGATGTTCTGAAACACATATTTAAGTGGAAGATCGCAGATAAACTTCAGTGGTTTGCTCAGAATGGTGATACGGTAGGCCCTCCTATTGTGGACTTGAGCTGTGGTGCTAATAATTTTAGCATCCTTATGAAGAAAAGGCTTGAGGAGGCTGGGAAGAAATGTTCGTACAGAAAATATGATTTACTTCCAACAAAGAATGATTTTAGTGTTGAAAGGAGGGATTGGATGACTTTCCAACAAACCGAGTTACCCACAGGGTCACAGTTGATCATTGGTCTCACCCCTCCCTTTGGTCATAACGCAGCATTGGCTAACAAGTTTATAGATAAGGCTCTTGAGTTTAAACCAAAGCTCCTAATTCTTATAGTAGACCCAAAGATAGAGAGGCTCAATAAAAAACTATCACTGTATGATCTTATATGGGAGGATGAGAAATTTCTATCAGACACGTCAATTTATGTACCTGGATCAGTTCATGTAAATGACAGACAAATGGATAAAAGGAATGTAAGGCCGCCCAGGCTCTCCCTTTGGAGCCGCTCTGACTGGACTACTAAACACAGAGTCATAGCCCAAGACTATGATCATGTGTGCAGCAAGCATGACACGTTAGCTGCTGCTGTTCATGTTACCTCTGGAACTTATGCTGACAATTCAAAGTTAACTGATGACCAAGAAGATCAAGCATCTGTAAGTGGTAATGTTCAGAAAAGAAGCATAACTTATAATGTTGATGAATATGGGAAGGGCATGCCTGGGAAGTCACGAAGGAAGAGAAAACATATTGAAGAAAATAATACAGAGGTAGCTGTGATCTCACCAGCCAAAAGGCATGCTGTAAATATAATATGTAATGCGGACCACACTCAACCCAATCCAATGAAGACAAGTTCTTTGGGTTCTGAACCTCGTACATTCAGTAAAAGCGTCAGTTTTGGACGTAGTAGAGGACCCCAATCTGGATATGGTGGTGGATTGCATGGTTTTGCTGCTGCTCCTAACTATGAATATGCAAGCAAACATTCGTGTGGTTGGCTCGAAGATTAG 3045 0.403 MKRGRSSHSDDEDECESEVQSISVSNYHLVDDEDNPVSFSVLPIQWNDSENCGGCEEGKVFLDGDTDSGLLKIFLQVTAWRFDLSKARPEVFLLAKDGRWIKIEKPRKAFQEKIRTILITLHFLRSVKGRLRQLSVGSLWQDLSKDRELSSYGFKPSQNDLSDHVLLIGKASKRDSVLAKSKLLLMVLEKLKRQSLLDEEVNDFEQPGLPVVEIDSYMLDKSNEESDEEMDALDVCAFCDNGGNVICCDGVCMRSFHATEEAGRENSCFSLGFTQKEVDEIQNFYCKNCECRQHQCFACGKLGSSDKVIGAEVFKCASVTCDRFYHPHCVAKLLPDVVKHVTKEFERNIADGNPFTCPLHYCCVCKGLENMMDPELQFAVCRRCPKAYHRKCLPREITADKSDTLRAWEGLLPKNRILIYCLNHEIDPELGTPVRDHIKFPKMKATAQKIDTTTIEQKKPSTNKRVMLKKNIDSDSSAGKSTSKGSKLTAKLSSDKVGGKKPSNKKISSSNMSKKPKSKETSRCLTENKMSILKKFEIPDTEKKYNQRTENEGLEQIERDNQINKLNTNFLSVKPIGKLSIDLPLLDADSEKSLLDLFKEASSSITLENVLEKHTFASTHSHSMRSVVEKTITTEKLEDSVNSVRTAIRMLESGCSIQDAEAVCDPDVLKHIFKWKIADKLQWFAQNGDTVGPPIVDLSCGANNFSILMKKRLEEAGKKCSYRKYDLLPTKNDFSVERRDWMTFQQTELPTGSQLIIGLTPPFGHNAALANKFIDKALEFKPKLLILIVDPKIERLNKKLSLYDLIWEDEKFLSDTSIYVPGSVHVNDRQMDKRNVRPPRLSLWSRSDWTTKHRVIAQDYDHVCSKHDTLAAAVHVTSGTYADNSKLTDDQEDQASVSGNVQKRSITYNVDEYGKGMPGKSRRKRKHIEENNTEVAVISPAKRHAVNIICNADHTQPNPMKTSSLGSEPRTFSKSVSFGRSRGPQSGYGGGLHGFAAAPNYEYASKHSCGWLED 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00199 1014 MobiDBLite consensus disorder prediction 953 982 - -
Phco3g00199 1014 SMART PHD_3 235 290 IPR001965 -
Phco3g00199 1014 SMART PHD_3 295 361 IPR001965 -
Phco3g00199 1014 SMART PHD_3 362 425 IPR001965 -
Phco3g00199 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 293 IPR013083 -
Phco3g00199 1014 MobiDBLite consensus disorder prediction 474 490 - -
Phco3g00199 1014 MobiDBLite consensus disorder prediction 455 526 - -
Phco3g00199 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 381 IPR013083 -
Phco3g00199 1014 MobiDBLite consensus disorder prediction 953 985 - -
Phco3g00199 1014 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 16 873 - -
Phco3g00199 1014 CDD PHD2_NSD 295 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00199 Phco-Chr3 1467631 1476756 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00199 3 1467631 1476756 Phco3g00199 3 1467631 1476756 ECH
Phco11g01929 11 15721737 15737651 Phco3g00199 3 1467631 1476756 PCT