Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00191 ATGCGTTTTAATGAGAGAAACGGACAGGTCCTCTTCAGTCTTGGCCTCCTTCACCGTGGATCTGCGCTAGGGCACTGCAAGCAGGAACAACATAGTGTGCAAGACCACTCAAAGAGAAGAACGTTGATGTTTGTCAACATCTCACCTGATCAATCTTCCACTGGCGAGTCACTTTGCTCTTTCCGCTTTGCAGCCAGAGCCAATGCTTGTGAAATTGGGATTACACGGAATTGTAAATTTCATATGGAAGCGATTAATTCTTATGGTAAAGAAAAGGAAGCCAGAACTGAAGCTGAGCTTATAAAGCAGAACGAAGAGTTAAAGCAAATTAGAGATGAAGGTGACCGTCTATTGAGGCAATGCAGTGAGGGCCTTTCACTGAATTTTGCTGGCTTAAGCAACACTGAAACTGGATCCACCCACAACAGATTTGTGGTTCCTGCACTTGCCCTGCACCTCCAAACACAATCTGTTACAGAACTATGCATCATAGTTACCTACCTGCATGATAACATTAGCACTGCAGCCAATGTTGGAGTACTGGCAACCGAAGCTTTTGCTCTAGCCTTGAGAAACAATTGCCTCATTCTACATCACTGCACCATAAACTCCCAGGAAACATCGCTGTGGGCCATCACTTTAGCATCTCCTCTACCTTCTATCCCTGCTCCATATACATTACTTTTGAGGCTCTGCAGCTACAGTATGTTGATCTCCCATCACTCTACTGCAGACCAAGTCACAACTCCAACTTTGTGCAACATGATGTTATGCAGAAAAACTGCACTAGTTCCAATAATGTTGTATTTCCACTGCATGGGATCTAAGGCAGGTTCCCAAATCACTGATATCATGGAATCCCCACAGTCTGTTGTGTCACCATTCAAGAACTCTGTCTTGGGTGAAGCTGAGAAGTATAAGTCTGATATTTACACGCAAAGCTCGGGTCCTTTCTCTAAGGACATTGAAGTCAATGGAAAGGAAGCTGTCAGGTCCAGTTCAGAGGACTTCATTGGTGCTGTTGATGTTTACATTCATCAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAAATTAGCTTGACTAGTAATCCTGAGAATGCCGTCTCTACCAAGACTATCAATGGAGGAGGAAGGAACCCTGTCTTTAATGAGAATCTTCGTCTAAGCGTTAGGACAGTTGATTCTGCTGTCAAATGTGAAATCTGGATGCTGAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTTGGCTTTGCTTTGGTGCCATTGTCAGAAGTATTGGTGAAGGAAGGCAAACTAGAGAAAGAGTTCTCTCTTTCCTCAACTGATCTATTCCATTCACCAGCCGGTTTTGTGCAATTGTCTCTCGCATACACGGGCACTTCGCCTGATGTTTTTGCCATTTCTGCAATGCCTACTGCAAATGGCACCGAGAAGGACTCCGAATCTTGCGAATCACTGGTCAGAGATTTAGATAAAATTGAATTTCCGGATCCAAAAATTGCAAATGAAGACCACCTGATGGTTTCAGAATACTTTGGTATTCCATGTGAGGAGAGCCAGTGTTCTGGTAGCTTGACCACTACTGATACTGAAAATCTGACTTCTGAAGCAGGCGTTCAGCTTGTGGAGAGCTTCTCAGCATGCAGTGTGGAGTCTGCCCAACCTCCTAAGGTTGATTCTCCACCTACCAGTGTGTCAACAAATGGAGTTTCATCTCCTTCAGTGGCTGCAAGCTCAGACTCATCAGATGCTGCTGCTTCCAAGTCTCCCAATCAGGAACAAGTTTCGGCCGACAAAGAGAAAAAAGGGGAAGTCAAAAATGGTGAGACTGATTCCTCAAATGGGGTGCTGAATGAGTCATTCCCTAAGCCTGTTGTGACCGTTAACATCGAGCCTGAGTCAAACGTGGTGCAGCAGGACATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACAGAGTCGTTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCAAGCTCCGAACAGCAGAAGATACAGACACCAAAGAGCTCTAACTCCCGTGTGTTTTATGGCAGCAGGGCTTTCTTCTGA 2130 0.4465 MRFNERNGQVLFSLGLLHRGSALGHCKQEQHSVQDHSKRRTLMFVNISPDQSSTGESLCSFRFAARANACEIGITRNCKFHMEAINSYGKEKEARTEAELIKQNEELKQIRDEGDRLLRQCSEGLSLNFAGLSNTETGSTHNRFVVPALALHLQTQSVTELCIIVTYLHDNISTAANVGVLATEAFALALRNNCLILHHCTINSQETSLWAITLASPLPSIPAPYTLLLRLCSYSMLISHHSTADQVTTPTLCNMMLCRKTALVPIMLYFHCMGSKAGSQITDIMESPQSVVSPFKNSVLGEAEKYKSDIYTQSSGPFSKDIEVNGKEAVRSSSEDFIGAVDVYIHQARDIHNICIYHKQDVYAKISLTSNPENAVSTKTINGGGRNPVFNENLRLSVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKEGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGTSPDVFAISAMPTANGTEKDSESCESLVRDLDKIEFPDPKIANEDHLMVSEYFGIPCEESQCSGSLTTTDTENLTSEAGVQLVESFSACSVESAQPPKVDSPPTSVSTNGVSSPSVAASSDSSDAAASKSPNQEQVSADKEKKGEVKNGETDSSNGVLNESFPKPVVTVNIEPESNVVQQDIVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQQKIQTPKSSNSRVFYGSRAFF 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00191 709 Pfam C2 domain 340 445 IPR000008 -
Phco3g00191 709 MobiDBLite consensus disorder prediction 672 697 - -
Phco3g00191 709 SMART C2_3c 340 443 IPR000008 -
Phco3g00191 709 MobiDBLite consensus disorder prediction 603 617 - -
Phco3g00191 709 Gene3D C2 domain 335 490 IPR035892 -
Phco3g00191 709 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 337 469 IPR035892 -
Phco3g00191 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 108 IPR027417 -
Phco3g00191 709 ProSiteProfiles Kinesin motor domain profile. 1 70 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phco3g00191 709 PANTHER EXPRESSED PROTEIN 285 709 - -
Phco3g00191 709 MobiDBLite consensus disorder prediction 561 629 - -
Phco3g00191 709 Gene3D - 19 116 - -
Phco3g00191 709 MobiDBLite consensus disorder prediction 561 602 - -
Phco3g00191 709 Coils Coil 93 120 - -
Phco3g00191 709 CDD C2 341 447 - -
Phco3g00191 709 ProSiteProfiles C2 domain profile. 326 445 IPR000008 -
Phco3g00191 709 MobiDBLite consensus disorder prediction 676 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00191 Phco-Chr3 1377626 1388653 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00191 3 1377626 1388653 Phco3g00191 3 1377626 1388653 ECH
Phco11g01902 11 15374041 15375327 Phco3g00191 3 1377626 1388653 PCT