Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01902 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTTTTGGGTGAGGGTGAGAAGCACAAGTCTGAAGTTTTCTCGGGTAACTCTAGTCCCTTGTCCAAGGACATTGAAGTGAATGGGAAGGAAGTTGTCATGTCAAATGTAGAGGAGTGTCTTGGAGTGCTTGATGTTTACATACATCAGGCCAGGGACATTCAGAACATTTGCATATACCACAAGCAAGATGTTTACGCTAGGATTTGCCTGACCAGTAATCCTGAGAACACTGTGTCTACCAAAACCATCAATGGAGGAGGAAGGAACCCTGTGTTTAATGAGAATCTTCAAGTCAATGTTGGAACTGTTGATGCTTCTCTCAAGTGTGAGATATGGATGCTTAGCAGGGTGAAGAATTATCTTGAAGACCAGCTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTTCTAGTCCAGAATGGGAAACTGGAGAAAGAGTACTCTCTTTCTTCAACCGATCTATTCCATTCTCCTTCAGGTTTTGTCCAGTTGACACTTTCTTACACTGGTGCTTCACCTGATGTTATGGCAATTTCTGCAATGCCAAGCAAGGTGGCCACAGATACCCCTGTGCAGGATTCTGAAACATCCGAATCTCTGGCCCGGGAACTGGACAAAATTGAGTTCCCGGATCCGAAGATTGCGAATGAAGACCACTTGATGGTTTCAGAATACTTTGGCATTCCATGTGAGGAGACTCAGTGCTCTGATAGCCTGGCTACTTCTGATGCCGAAAATCGCAGTTGCGAAGCCGGTGTTCGCCTTGTGGAAAGCTTCTCAGCATGCAGTGGTGAGTCTGTTCAGCCACCGAAGGTTGATTCCCCACCCAGCAGTGTGTCAACAAATGGGGTTTCTTCCCCTTCTGTGCCTGCAAGCTCAGAATCATCTGATGCTGCTGCTTCTAAGTCTCCCGTTCAGGAGCATGTTTCAGGCACCAAAAAGGACAAAAATGTGGATGTCAAAGATGGTGACAGTGATTCTTCTACTTGGGTTCCTGGTGACTCATTCCCTAAGCCTGTTGTGTCTGTAAACATTGAGCCTGAGCCAAAGGTGGTGCAGCAGGATATAGTGGACATGTACATGAAAAGCATGCAGCAATTCACTGAGTCACTAGCAAAAATGAAGCTCCCTATGGACTTCGAAAATGAACCAACTAGTTCAGGAAATTCTACCACTGAGCAAAAGCTACAGCCTTCAAAGAGCAATAATTCCCGTGTGTTTTATGGTAGCAGAGCTTTCTTCTGA 1287 0.4577 MDSPQSVVSPFRSSVLGEGEKHKSEVFSGNSSPLSKDIEVNGKEVVMSNVEECLGVLDVYIHQARDIQNICIYHKQDVYARICLTSNPENTVSTKTINGGGRNPVFNENLQVNVGTVDASLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEYSLSSTDLFHSPSGFVQLTLSYTGASPDVMAISAMPSKVATDTPVQDSETSESLARELDKIEFPDPKIANEDHLMVSEYFGIPCEETQCSDSLATSDAENRSCEAGVRLVESFSACSGESVQPPKVDSPPSSVSTNGVSSPSVPASSESSDAAASKSPVQEHVSGTKKDKNVDVKDGDSDSSTWVPGDSFPKPVVSVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDFENEPTSSGNSTTEQKLQPSKSNNSRVFYGSRAFF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01902 428 PANTHER EXPRESSED PROTEIN 1 428 - -
Phco11g01902 428 ProSiteProfiles C2 domain profile. 42 161 IPR000008 -
Phco11g01902 428 MobiDBLite consensus disorder prediction 393 428 - -
Phco11g01902 428 CDD C2 57 163 - -
Phco11g01902 428 MobiDBLite consensus disorder prediction 396 422 - -
Phco11g01902 428 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 54 185 IPR035892 -
Phco11g01902 428 MobiDBLite consensus disorder prediction 322 337 - -
Phco11g01902 428 MobiDBLite consensus disorder prediction 277 355 - -
Phco11g01902 428 MobiDBLite consensus disorder prediction 277 321 - -
Phco11g01902 428 Pfam C2 domain 55 162 IPR000008 -
Phco11g01902 428 SMART C2_3c 56 159 IPR000008 -
Phco11g01902 428 Gene3D C2 domain 51 212 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01902 Phco-Chr11 15374041 15375327 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01902 11 15374041 15375327 Phco11g01902 11 15374041 15375327 ECH
Phco11g01902 11 15374041 15375327 Phco3g00191 3 1377626 1388653 PCT