Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00186 ATGCAGACGTCGTCGAAGACCATCTCTGCGGCTCTGCAACTGGTGGACGCCAAGAAAGAGAATTTGAAGAAAGCCTACGACGATCTCCAAACCCATTCCTCTCTCCTCTCTTCCTCCTTCTTCCCTCTCTCATGGTCCCACATCGACGCCCACTTCACCTCCCTCCACAACTCCCTCTCTCAACGCTTTCAGCTTCTTCACTCCCTCGATTCCCAACAGCAACACACTCACTCACCACCCTCTCCCTCCAAAGATCCCATTTTTCCACCCTCCCGTTCTGAACCATCTTCGCGAAACGACGCCGCATTGCCCAAAACCCACGCGGAACGCATGATCGCCTTCTGCAACTGCATGGACGGAAAAGGGTTGCGGGACTACGTTGGGGATCATTTCAAAGACAAGGTTGCGCTCGGGGTTGACCTTCAGAGTGCCTTCAAGCGTGCTTCCGATCCCGCGTCGATGGTTCTCGATGCATTGGACGGTGTCGTGGGTGCGAATGTGGTGAAAGATGATAAGGAATTGCGCAAAAGGAAGAGAACTTGCGGGTTGTTGTTTCAGCAGTTGAGGGCTGCGTCCGTTTCTGTGAGTCTTAAGGTGAGTAAGAGAGCAAAGAGGTTGTGTGTGGAGTGGAAGGGGAGCATGGCAAGTGAAGGTGGTGGTGATGGTGTTGGGGCCATGATTTTCTTGCAGTTTGTGGCGGCTTATGGACTGTTCTCTGAATTGACAAAGAATGAAATTGTCAGCTTCTCTGCCATGGCTGCTGCCAATGATGATCTTCCTGAGCTCTACAGAAGTGTTGGTTTGACAGACAAAGTTCCAGGTCTTGTTCAGAAACTTGTTGACAGGTGCAGACATATTCTAGCTGTCAAGTACGTTTTTGAGTTCAATCTTGCTGATAAGATTCCACCAATTCCCATTTTGAAAGCTCACGTGAATGAATCTCAGAAACTTGCTAAAAGACTTTCTGAGGAAGGGAAGTCACTTAATGAAATCACAGCCAGAGAAGTCCATGCACTGAAATCGGCAATTAAGGTTATTGAAAGTCATAATCTTCAAACAGAATATCCACCTGAAAGCCTTCAACAGCGTATAGATCAATTGACGAAGCATAAGACAAATTTAAAATATAATGCGTCGGCTTTTTCTGCGAAGCCTCCTTCTCATCAGCAGCTACAAAGTGGGATCAAGCGTCCTCGAATTTCTACCCCAGTTGGTTCTGCAGCTGTCCTGAATAGTGTAGGTGGTGCCAGTTCAACCCCTCACCACTACAAACAACCTCATTTCCAGTCATCAGGTTTGTTGCCGGAGCAACAACCTTTGTTCCATTCACCAGGTTTGTTGTTGGAACAACAACCTCGTTTCCACTCATCAGGCTTGCTGCCTGAACCACAACCTCATTTCCAGTCACAAGGTTTGTTATCGGAACATCGAAATCCGTACATGAACTTGCCAACCATGTCATATGGCATGAAGGCTCCATCCCCAACCATCTTGCCTTATACAGGCACCTCAACTGGGCCTTATGGTCTTGATGGTGTCCCAAAGGGTCCCAGTGGCAACCTTGGTCATGGTGGTTCTCTTCCAAATTCATCAGAGCCACTTGTGCTGTCTGGTTATCATGATAGTGTCTCTGCTTATGGTGTGCAACATTATTATCAAACATCTTATCATCAGTAG 1677 0.477 MQTSSKTISAALQLVDAKKENLKKAYDDLQTHSSLLSSSFFPLSWSHIDAHFTSLHNSLSQRFQLLHSLDSQQQHTHSPPSPSKDPIFPPSRSEPSSRNDAALPKTHAERMIAFCNCMDGKGLRDYVGDHFKDKVALGVDLQSAFKRASDPASMVLDALDGVVGANVVKDDKELRKRKRTCGLLFQQLRAASVSVSLKVSKRAKRLCVEWKGSMASEGGGDGVGAMIFLQFVAAYGLFSELTKNEIVSFSAMAAANDDLPELYRSVGLTDKVPGLVQKLVDRCRHILAVKYVFEFNLADKIPPIPILKAHVNESQKLAKRLSEEGKSLNEITAREVHALKSAIKVIESHNLQTEYPPESLQQRIDQLTKHKTNLKYNASAFSAKPPSHQQLQSGIKRPRISTPVGSAAVLNSVGGASSTPHHYKQPHFQSSGLLPEQQPLFHSPGLLLEQQPRFHSSGLLPEPQPHFQSQGLLSEHRNPYMNLPTMSYGMKAPSPTILPYTGTSTGPYGLDGVPKGPSGNLGHGGSLPNSSEPLVLSGYHDSVSAYGVQHYYQTSYHQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00186 558 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 84 390 - -
Phco3g00186 558 MobiDBLite consensus disorder prediction 382 436 - -
Phco3g00186 558 MobiDBLite consensus disorder prediction 70 101 - -
Phco3g00186 558 Coils Coil 12 32 - -
Phco3g00186 558 Pfam Frigida-like protein 108 377 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00186 Phco-Chr3 1344274 1346732 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01898 11 15312053 15316131 Phco3g00186 3 1344274 1346732 PCT