Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01898 ATGGATACACTGAACACGATCTCAACAGCACTGAACTTGGTCGATTCCAAGAAAGAGAATCTGAAGAAAGCCTTCGATGATCTCCAAACCCTTCTCTCTCCTCTTCCTCTCGCATGGCCAGACCTCGATTCTCACTTCACCTCGCTCCACCTCTCTCTCTCCCACCGCTTCCAACTCCTCCAGTCCCAAACCCTAACCCTAACCCCAACCCCAACCCCAACCCCAATTCCCGACCCACCTGCCCAAACCCCTAATGAAACGATTTTTTCATCAAACCCTAACGACCCATCATCGAATCATGACGAATCTTCACCTGGGGTGTCCCTCCAAAACGACTCCGTCCCAGGCTCGGTTACGCCTAGAAAAGAAATGATCGTTCTTTGCGAGAAAATGGATGGTGCAGGGTTGAAGAATTACGTCAATGACCATTTTTTGGACAGGGCCAGAGTTCAGGCGGAGCTTCCCGTCGCATTTCAACATGCGCCGGACGCGGGTGTGATGGTTCTGGAAGCGTTGCAGGGATTTCATGGAGATGGTAGTGGATTGAAGGAATGGGAATTGAGGAAAATGAGGAAGAGTTGTGTTGTGTTATTGAAGCAATTCAGGGTTGCTGCTCTAAGTGTGAGTGCTGAGGCTAGGGTGAGAGCTGTGAAGTTGGCCCAGGCATGGAAAGAGAAGTTGGTGGGTGATGATAACAATGCGTTTGGAGCTTTGGGGCTTCTGCATTTGATTGCTGCATTTGGTTTGGTCTCTGAATTCAGCTTGGATGAGCTTGTTGACTTTTCGGTCGTGGCCCCCACCAATGAGGAGTTCCCAGAGCTCTGCCGGGCGGTCGGGTTGACAGAGAAAGTTCCCGATATCGTTCAGAAACTTACAGATAAGGACAAACATATCCCAGCTGTTAAGTATATTCTTGAGTTTAATCTTGCTGATAAGATTCCACCTGTTCCTCTTTTGAAAGCTGGTGTGGATGAAGCTAAGAAACTTGCTAAAAAACTTTCCGATGAAGGACATTCATCTAGTGAGAGTACTGCTAGAGAAATTCATACGCTGAAATTGGTGATCAAGATTATTGAGAATTATAAGCTTGAATCTGAACACCTAAGAGCTAGCGTTGAGCAGCGTATAGAGCAATTAAAGAGGCAGAAGACCAATAATAAACGAGCTACTCCAGCCCCTCCTGCAAAGCCTCAGCATAAACAGCAGCAACAACATCAAAAGAGGAATATGCAGAAGCAGCAGCATACTGGGATCACGCATCCTCGAGCATTTGCTCCAGTTGTTCCTGCAGCTGTCCTCAAGAATGTCAATTCGGCAATGCACCACTACCAGCAACCTCGTGTCCATCCATCAGGTTTGTTTCCAGAGCATCCAAATCCCTATACAAGCTCGCCAGCCATGCCAATTGGCATGATGGCTTCTACTGGAAAATTTCTTCCATATGCAGGTCCTTCTACTGGACCTTATGGCCATGATGGTGTCCCAATTGGTTCCCGTGGCAACCCCAATCTAAGTGGTTCTCATCTAAGCTCATTGGAGCCACATGTACCAACTGGTGGTTATTATGATAGAACCTCTACTTTTGGTGGTATTGGTCTGCAACATTATTACCAAGCATCTTATTACCCTCAATAG 1635 0.4709 MDTLNTISTALNLVDSKKENLKKAFDDLQTLLSPLPLAWPDLDSHFTSLHLSLSHRFQLLQSQTLTLTPTPTPTPIPDPPAQTPNETIFSSNPNDPSSNHDESSPGVSLQNDSVPGSVTPRKEMIVLCEKMDGAGLKNYVNDHFLDRARVQAELPVAFQHAPDAGVMVLEALQGFHGDGSGLKEWELRKMRKSCVVLLKQFRVAALSVSAEARVRAVKLAQAWKEKLVGDDNNAFGALGLLHLIAAFGLVSEFSLDELVDFSVVAPTNEEFPELCRAVGLTEKVPDIVQKLTDKDKHIPAVKYILEFNLADKIPPVPLLKAGVDEAKKLAKKLSDEGHSSSESTAREIHTLKLVIKIIENYKLESEHLRASVEQRIEQLKRQKTNNKRATPAPPAKPQHKQQQQHQKRNMQKQQHTGITHPRAFAPVVPAAVLKNVNSAMHHYQQPRVHPSGLFPEHPNPYTSSPAMPIGMMASTGKFLPYAGPSTGPYGHDGVPIGSRGNPNLSGSHLSSLEPHVPTGGYYDRTSTFGGIGLQHYYQASYYPQ 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01898 544 Coils Coil 362 389 - -
Phco11g01898 544 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 117 407 - -
Phco11g01898 544 MobiDBLite consensus disorder prediction 385 400 - -
Phco11g01898 544 MobiDBLite consensus disorder prediction 83 117 - -
Phco11g01898 544 MobiDBLite consensus disorder prediction 380 417 - -
Phco11g01898 544 MobiDBLite consensus disorder prediction 66 117 - -
Phco11g01898 544 Pfam Frigida-like protein 118 390 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01898 Phco-Chr11 15312053 15316131 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01898 11 15312053 15316131 Phco11g01898 11 15312053 15316131 ECH
Phco11g01898 11 15312053 15316131 Phco3g00186 3 1344274 1346732 PCT