Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00145 ATGTCGGACGAAGGTCGACCATTACCAAAGTTTGGTGAATGGGACGTTAATGATCCTTCTTCTGCTGAAAGCTACACAGTCATTTTCAACAAAGCAAGAGATGATAAAAAGACAGGTGGCAAAGATTCACCTGGAAAGAGAAATCATCGTACCAGACATCATTTAGATCCTGCTAGAACACAAAATAAAAAATGGTTTTGCTGCATACAAAGTCCTCAAGCAGAGTCATAG 231 0.3983 MSDEGRPLPKFGEWDVNDPSSAESYTVIFNKARDDKKTGGKDSPGKRNHRTRHHLDPARTQNKKWFCCIQSPQAES 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00145 76 MobiDBLite consensus disorder prediction 30 45 - -
Phco3g00145 76 MobiDBLite consensus disorder prediction 30 61 - -
Phco3g00145 76 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 4 68 IPR040387 -
Phco3g00145 76 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00145 Phco-Chr3 958568 959604 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00145 3 958568 959604 Phco3g00145 3 958568 959604 ECH
Phco11g01847 11 14833632 14838434 Phco3g00145 3 958568 959604 PCT