Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00141 ATGGCGAGTAACAGAGAGAGAGAAGAGTCTCTGACATTCACAATCCCTTCTTCCTCTTCCCATTCCTCCCCCATCACCGTCTCTGACCAACTCGACAGCTATCTCGCCGACCCCAGAAGCGCCTCCGGAAGCTTCCAGAACGACGGCCTTCTCTCCTCCGCTGACGCCGCTTCCGATCCCGATTTTGGATTCTCCCGCCCCGATTTCCGCCAGAGTCCCCTTGCCGGCACCGTGGAGCTCTACCAACGCCATGTCTTCCTCTGCTATAAGAACCCTCGCGTTTGGCCACCGCGCATAGAAGCCGCAGAGTTCGATCGCTTGCCAAGGTTGCTTCACGCCGCCGTTGTTGCAAGGAAGACTCATATGAAAAAGGAGACTCGGTTAACGATTTGTGAGGGTCATGATGGAACTGAGACATCCAATGGGGATGTGTTGATCTTTCCTGACATGGTCAGATACAGGAGGTTAACGCATTTTGATGTTGAAACCTTTGTTGAAGAGGTTCTTGTCAAGGATGGGGAATGGCTTCCTGGAACTCCCGAGGCATTGAGAGGTTCGTTTGTTTTTGTGTGTTCACATGGATCCCGTGATCGCAGATGTGGGGTTTGTGGACCTGTCTTGGTCAGTAGATTCTGGGAGGAGATAGAGTTACAAGGTCTTCAGGGTAAAGTGTTTGTAAGCCCGTGTTCTCACATTGGGGGAAGTCAGTATGCAGGAAACGTCATTATCTTTGGACCTAGCATGAATGGAGAAATCACTGGCCACTGGTATGGATATGTTACCCCGGATGATGTGCCTTTATTGCTTCAACATCATATCATAAAAGGGGAGGTCTTAGATTCATTATGGAGGGGTCAGATGGGTTTCTCAGTAGATGAACAGCTGAAAAAGCAAGAACAAAGGCTTCTGCTATTCGGCTTAAGAAATTTAGAAGAAAGCACTGATGTATCTAGATCTCAAGACAATTTTGTGAGCTGCTGCCAGTCAAATGCTAGCTGCTGCCAATCAAATGCTAGCTGCTGCCAGTCAAATGGAGACTCTTCAATCCTTCAGAATCGATATTTAGTGGAAAAGAGAATGGACCCGGATGTCATTGAGGCAGAGGCAAAGCTCTCAGCTGATCATAAGAACAACGAGTCTGTGTTTTCTCGGATCAATAGTGGCAAAGGAGCTTCACGCAAGTTTCCTTCCGTGACAACTTGGCTTGATGGCTGGGAGCAAGAAGATACATATGCAGCTCTTGCTGTTGTATGCGCTGCTGTGTCAGTTGCCATTGCCTACAACTGCTACAAGCAATTTCATTAA 1305 0.4828 MASNREREESLTFTIPSSSSHSSPITVSDQLDSYLADPRSASGSFQNDGLLSSADAASDPDFGFSRPDFRQSPLAGTVELYQRHVFLCYKNPRVWPPRIEAAEFDRLPRLLHAAVVARKTHMKKETRLTICEGHDGTETSNGDVLIFPDMVRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALRGSFVFVCSHGSRDRRCGVCGPVLVSRFWEEIELQGLQGKVFVSPCSHIGGSQYAGNVIIFGPSMNGEITGHWYGYVTPDDVPLLLQHHIIKGEVLDSLWRGQMGFSVDEQLKKQEQRLLLFGLRNLEESTDVSRSQDNFVSCCQSNASCCQSNASCCQSNGDSSILQNRYLVEKRMDPDVIEAEAKLSADHKNNESVFSRINSGKGASRKFPSVTTWLDGWEQEDTYAALAVVCAAVSVAIAYNCYKQFH 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00141 434 MobiDBLite consensus disorder prediction 1 26 - -
Phco3g00141 434 FunFam APD1p protein 185 284 - -
Phco3g00141 434 Gene3D Glutaredoxin 186 285 - -
Phco3g00141 434 CDD TRX_Fd_Sucrase 185 287 IPR009737 -
Phco3g00141 434 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 39 421 IPR009737 -
Phco3g00141 434 SUPERFAMILY Thioredoxin-like 187 289 IPR036249 -
Phco3g00141 434 Pfam Sucrase/ferredoxin-like 74 285 IPR009737 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00141 Phco-Chr3 933485 936211 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00141 3 933485 936211 Phco3g00141 3 933485 936211 ECH
Phco11g01840 11 14763154 14766136 Phco3g00141 3 933485 936211 PCT