Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01840 ATGGGTAGTAGCAGCAACGCCTCCTCTTCGGATTTCTTCTACCGCCGGCACGTGTTCCTATGTTACAAGAACCCCGCCGTGTGGCCGCCGCGCATTGAGGCTGCGGAGTTTGATCGCTTGCCCAGGTTGCTTCACGCTGCCATCAATGCAAGAAAGCCTCATATCAAGAAAGAGACCTGCTTAACAATATGTGAGGGGCATGATGGGACTGAAACATCAAATGGAGATGTATTAATCTTTCCTGACATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTCTTGTCAAGGAAAGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGCTTCATATGTTTTTGTGTGCTCGCATGGATCACGCGATCGGAGGTGTGGGGTTTTTGGACCTGTCTTGGTCAGTAGATTCAGGGAAGAGATAGGGTTACATGGACTCCAAGGGAAAGTGTTGATTAGCTCCTGCTCTCACATTGGGGGGAATAAGTATGCAGGAAATGTTGTTATAATTGGATCAAGCATCAATGGCGAAGTCACAGGCCACTTGTACGGATATGTTACTCCAGATGATGTGCCTTTATTGTTTCGCCAGCATATCATTGCAGGGGAGATTTTTGACTCACTATGGAGGGGTCAAATAGGTTTATCAGAAGATGAACAGATGAAAAAGCAAGAGCAAAGGCTTCAGCTAAATGGTGCAAGAAATTTAGAAGGAAGCGAAGTCGCCGGCCGCAGTCAAACAGATTGTGAGAGCTGTTGCCAGGACAATGAAGACTCTTGTTGCTGTCAGAATGATGTACTAGAGGAGAGGAGAGAGGTTTCAGGTGATCATAAGAGCAAGGAGAATCTGAATGTGCTTTGTCGGATCAACAAGGGAAAAGGAGTGTCGCACAAGTTTAGTTCCACACCAACATGGCTTGACAGCTGGGAGCAAGAGGATACTTATGCTGCTCTTGCTGTTGTCTGTGCTGCCGTGTCGGTCGCCATTGCCTATAGCTGCTACAAGCAGTGA 1032 0.4622 MGSSSNASSSDFFYRRHVFLCYKNPAVWPPRIEAAEFDRLPRLLHAAINARKPHIKKETCLTICEGHDGTETSNGDVLIFPDMIRYRRLTHFDVETFVEEVLVKEREWLPGNPESLKASYVFVCSHGSRDRRCGVFGPVLVSRFREEIGLHGLQGKVLISSCSHIGGNKYAGNVVIIGSSINGEVTGHLYGYVTPDDVPLLFRQHIIAGEIFDSLWRGQIGLSEDEQMKKQEQRLQLNGARNLEGSEVAGRSQTDCESCCQDNEDSCCCQNDVLEERREVSGDHKSKENLNVLCRINKGKGVSHKFSSTPTWLDSWEQEDTYAALAVVCAAVSVAIAYSCYKQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01840 343 CDD TRX_Fd_Sucrase 119 220 IPR009737 -
Phco11g01840 343 Gene3D Glutaredoxin 118 218 - -
Phco11g01840 343 FunFam APD1p protein 118 217 - -
Phco11g01840 343 Pfam Sucrase/ferredoxin-like 14 218 IPR009737 -
Phco11g01840 343 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 11 332 IPR009737 -
Phco11g01840 343 SUPERFAMILY Thioredoxin-like 120 222 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01840 Phco-Chr11 14763154 14766136 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01840 11 14763154 14766136 Phco11g01840 11 14763154 14766136 ECH
Phco11g01840 11 14763154 14766136 Phco3g00141 3 933485 936211 PCT