Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00117 ATGACCGATATACCCTTCTCATTCTACACCTTTGACCGTCATATAAAACTATCTCAGCTCTCATCATCGCAATGCATACAAAGCCAAATTAGACCAACAGCAAACACACATTCTTATTTCCCATTATACCCCTCCTCGCAAAATATCCCAATGCCACTAACCCTAAATCTCACGCCGCTCACCGGTGCTGCCACGATCATCCGATCTCCGCCCAGGGCCACGATCATCCGGGCATTCACGGCGGCGATCGATTCCCGGAGGCCGGCGAGCCTCTATGAGGTTCTCCGGATCAAGCAGAGCGCGTCGTCGATGGAGATAAAATCGGCGTACCGGAACCTGGCTAAGGTGTACCACCCTGATTCGTCGCTCCGGCGTTCGGAATCGGACGAACGGGACTTCATCCAGATCCACGACGCGTACGAGACGTTGTCGGATCCGTCGGCGAGAGCGGTGTACGATCTGTCGTTGATGGCGGTGCGCGGCGGTAATGGCTCCTTCTCTTCTTTGGTGGCTCCGAATGGATCTTCCGGGTTGTACTACCAGACCCGCAAGTGGGAAACGGATCAGTGCTGGTAG 576 0.5469 MTDIPFSFYTFDRHIKLSQLSSSQCIQSQIRPTANTHSYFPLYPSSQNIPMPLTLNLTPLTGAATIIRSPPRATIIRAFTAAIDSRRPASLYEVLRIKQSASSMEIKSAYRNLAKVYHPDSSLRRSESDERDFIQIHDAYETLSDPSARAVYDLSLMAVRGGNGSFSSLVAPNGSSGLYYQTRKWETDQCW 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00117 191 PRINTS DnaJ domain signature 110 125 IPR001623 -
Phco3g00117 191 PRINTS DnaJ domain signature 128 148 IPR001623 -
Phco3g00117 191 PRINTS DnaJ domain signature 92 110 IPR001623 -
Phco3g00117 191 SUPERFAMILY Chaperone J-domain 90 168 IPR036869 -
Phco3g00117 191 ProSiteProfiles dnaJ domain profile. 90 156 IPR001623 -
Phco3g00117 191 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 62 191 - -
Phco3g00117 191 CDD DnaJ 92 145 IPR001623 -
Phco3g00117 191 Pfam DnaJ domain 91 153 IPR001623 -
Phco3g00117 191 Gene3D DnaJ domain 79 164 IPR036869 -
Phco3g00117 191 ProSitePatterns Nt-dnaJ domain signature. 133 152 IPR018253 -
Phco3g00117 191 SMART dnaj_3 89 148 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00117 Phco-Chr3 759411 759986 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00117 3 759411 759986 Phco3g00117 3 759411 759986 ECH
Phco11g01812 11 14481843 14484035 Phco3g00117 3 759411 759986 PCT