Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g01812 ATGATGACGACGCTGAATCTCGCCGCCGGACATCTTCCGCTTCATTCCTATTCATCAGCCGGCTCTCACCGCCAGACCTTGGTCCGCGCCGTTGCGACGGAAGCGGTCCAGGTGCGACTGCCGGCGCCGAGCCTCTACCAGGTGTTGCGAATCGAGCGCGACGCGTCGCCGACGGAGATCAAGTCGGCTTACCGGAGCCTTGCGAAGCTCTACCATCCCGACGCGGTGGTTCGGCATTCAACAGATGACGACAGAGCTGGCGAAGGCGCCGACGAAGACTTTATTCAGATCCGAAGCGCGTACGAGACGCTATCGGATCCATCGGCAAGGGCGATGTATGATCTGACGCTGACGGCTGCGCACGGCGGAAGACACCGCCGGTTTCCGGTTCCGCTTAGTCGGAACCACTCGTCGACGTTTTACGCAACGCGGAGATGGGAAACGGACCAATGCTGGACCTTGATGGTGCAGTTCAAAATGAAAGCAGAATTAGGTTACATGACCTTCATCACGGTCTGCTCCAATTTGCTAACAGCCCTGAAAGCGTCATCTTTTACCGACTTACACCTTGTGTTGTTGGTCACGACTTTATTTTTGTTATGTATTGCAATCTCTATGGGGCAGGATTTCAAACCCGTCACGCTTCTCCTTCACACATCGGGACAATTGTCATTTTAG 678 0.5501 MMTTLNLAAGHLPLHSYSSAGSHRQTLVRAVATEAVQVRLPAPSLYQVLRIERDASPTEIKSAYRSLAKLYHPDAVVRHSTDDDRAGEGADEDFIQIRSAYETLSDPSARAMYDLTLTAAHGGRHRRFPVPLSRNHSSTFYATRRWETDQCWTLMVQFKMKAELGYMTFITVCSNLLTALKASSFTDLHLVLLVTTLFLLCIAISMGQDFKPVTLLLHTSGQLSF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g01812 225 Gene3D DnaJ domain 32 128 IPR036869 -
Phco11g01812 225 PRINTS DnaJ domain signature 64 79 IPR001623 -
Phco11g01812 225 PRINTS DnaJ domain signature 89 109 IPR001623 -
Phco11g01812 225 PRINTS DnaJ domain signature 46 64 IPR001623 -
Phco11g01812 225 Pfam DnaJ domain 45 114 IPR001623 -
Phco11g01812 225 ProSiteProfiles dnaJ domain profile. 44 117 IPR001623 -
Phco11g01812 225 SMART dnaj_3 43 109 IPR001623 -
Phco11g01812 225 CDD DnaJ 46 106 IPR001623 -
Phco11g01812 225 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Phco11g01812 225 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 22 152 - -
Phco11g01812 225 SUPERFAMILY Chaperone J-domain 35 118 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g01812 Phco-Chr11 14481843 14484035 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g01812 11 14481843 14484035 Phco11g01812 11 14481843 14484035 ECH
Phco11g01812 11 14481843 14484035 Phco3g00117 3 759411 759986 PCT