Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02989 ATGGAAGGGGTGGCCATGCTGAAGCAGCTAATTGGTCAGCTTCAGCAGCTCTTGGACTCTTCCCATTCCCATTCTCTCATTCTTCAACCTTCTCACCACACTCTTCTCTTCCAACAACAACAACAACACCAACAACAACAACAACATCCCAGATGGACCTCCCTTGACATTGAAGATAGCTCTGTAGATGACTTTTGTGGCCTTGTAGTGACAGCAGGAAAGTCTGGCAGTTTCAGGATGTCAGAGCCTGTGAAGCCTCCACCTACTAAGAAGTCTCGTAGAGATAGAAGCAGGGGCAAATCATCTGGACGATCCTGTTCAACGGAAGTCATGGAACAAGAAATTTGGAAAAATTTTCCTGAAGATTTATTCGAGGCTGTGATTGCGCGACTTCCCATTGCTACATTTTTCCGCTTCCGCTCTGTATGCCGGCAGTGGAATTCCATGCTGACTTCTCAAAGTTTTTCTCAGCATTGTACTGAAGTTACACAAGCAAATCCATGGTTTTACACCATTACCCATGAAAATGTGAATTCGGGAGCTATGTACGACCCTTCTTTGAAAAAATGGCACCACCCAACTATATCAACACCGCCCACAAAATTGATTGTTTTACCCGTGGCTTCTGCTGGTGGTTTAGTTTGCTTTCTTGACATTGGTCATCGGAACTTCTTTGTTTGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGATCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGACAATAAATGGAAACTCAGCTGGTTCAGGCTACAAGATCTTATGGGTGGGTTGTGATGGGGAATATGAAGTTTATGACTCAGTCAGAAATTCTTGGATACGTCCTGGAAACATGCCTGCAGGTATGAAGCTGCCACTGTCGCTTAACTTTAGGTCTCAAGCTGTCTCTATTGATAGCATGCTTTACTTCATGCGATCAGACCCAGAAGGGATTGTTTCTTACGATATGGCAACTGGGGTTTGGAAACAATATATAATCCCAGCGCCATTGCATCTGACGGATCACACTCTGGCCGAGTGTGATGGCCAGATCATGCTTGTGGGTTTGCTCACAAAGAATGCAGCTACTTGTGTATGCATATGGGAGCTGCAGAAAATGACACTATTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCCTGAGATCGAAACAAATGAATAGATTGGTTACTTACAACATAGCAAGGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCGCGTGGGAGAAAACGACAGTGGATAGCTTGTGGTACTGCATTTCATCCATGCCTGACAGCGGTGGCATGA 1398 0.4549 MEGVAMLKQLIGQLQQLLDSSHSHSLILQPSHHTLLFQQQQQHQQQQQHPRWTSLDIEDSSVDDFCGLVVTAGKSGSFRMSEPVKPPPTKKSRRDRSRGKSSGRSCSTEVMEQEIWKNFPEDLFEAVIARLPIATFFRFRSVCRQWNSMLTSQSFSQHCTEVTQANPWFYTITHENVNSGAMYDPSLKKWHHPTISTPPTKLIVLPVASAGGLVCFLDIGHRNFFVCNPLTQSFKELPARSVKVWSRVAVGMTINGNSAGSGYKILWVGCDGEYEVYDSVRNSWIRPGNMPAGMKLPLSLNFRSQAVSIDSMLYFMRSDPEGIVSYDMATGVWKQYIIPAPLHLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPRGRKRQWIACGTAFHPCLTAVA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02989 465 ProSiteProfiles F-box domain profile. 113 158 IPR001810 GO:0005515
Phco2g02989 465 PANTHER BNACNNG10540D PROTEIN 92 459 - -
Phco2g02989 465 CDD F-box_AtFBW1-like 118 155 - -
Phco2g02989 465 Gene3D - 169 452 IPR015915 GO:0005515
Phco2g02989 465 MobiDBLite consensus disorder prediction 77 107 - -
Phco2g02989 465 SMART fbox_2 119 159 IPR001810 GO:0005515
Phco2g02989 465 Gene3D - 116 155 - -
Phco2g02989 465 Pfam F-box domain 116 155 IPR001810 GO:0005515
Phco2g02989 465 SUPERFAMILY F-box domain 111 191 IPR036047 GO:0005515
Phco2g02989 465 FunFam F-box only protein 6 166 452 - -
Phco2g02989 465 SUPERFAMILY Galactose oxidase, central domain 180 446 IPR011043 -
Phco2g02989 465 FunFam F-box only protein 6 116 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02989 Phco-Chr2 58663996 58667806 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02989 2 58663996 58667806 Phco4g02013 4 39995435 39998398 PCT