Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02980 ATGTCTTCAGACATGCCCTTCACTTCCAAAAGACGAAAAACATGTCCGGAGAAAACCTCCGACTTCTTCGAATCTTTGCCGGACGATCTTCTTCTCTCTATCCTCTGCAAGCTCAGTGCCACAGCATCTTCACCCTCCGATTTTATCAATGTCTTAGTAACGTGCAAGAGACTAAACTCTCTGGGCCTTCACTCTCTCGTGTTATCAAAAGCATCCCACAAAACATTCTTGGTCAAACCTCAAAATTGGTGTGATTCTGTTCATCGTTTCCTCAAACACTGTGCCGATGCCGGAAACATTGAAGCCTGTTACACACTCGGCATGATTCGGTTTTATTGTCTGCAAAACAGAGGGAGCGGCGCGTCGTTGATGGCGAAGGCGGCGATGAACTCTCACGCGCCGGCGCTGTATTCTCTCGCGGTTATACAGTTCAACGGAAGCGGCGGCACGAAAAACGACAAGGACCTTCGGGCCGGAGTGGCGCTGTGCGCACGCGCGGCTTTTCTCGGTCATATCGACGCGCTGCGTGAGCTTGGTCATTGCTTGCAAGACGGTTACGGCGTTAAGCAGAACGTAGCGGAAGGTCGACGTTTTCTGTTGCAAGCCAACGCGCGTGAACTCGCCGCCGTGCTCTCCACCGCGAATAACAAGCGTGCCTGGGTGACGTGGAACCTCCCGGTTCCGCACCCGCGACTCCGTTTGGGAACCGGGTCGGGTTGTCCTCTGTTGAGTGATTACGGTTGCAACGTGCCAGCGTCGGAGACTCATCCGGCCAGTAAGTTTTTATCGGAGTGGTTTGTTATTCGGAGCGGGTCGCTTGGTCCGGGTATGAGACTGTGTTCACATTCGGGTTGCGGGCGACCGGAGACGAGGAGGCACGAGTTCCGAAGGTGTTCAGTATGCGGTGTAGTGAATTATTGCTCACGCGCGTGTCAGGCGCTGGATTGGAAATTCCGGCACAAGGCGGAATGTGCTCCCGTTGAGAGGTGGCTCAATGACGACGGGGAAGATGTCGCCGGCGACAACGGCGGTGGCGGTGACGACGTAATGATGGCTAATAGCTAG 1065 0.5446 MSSDMPFTSKRRKTCPEKTSDFFESLPDDLLLSILCKLSATASSPSDFINVLVTCKRLNSLGLHSLVLSKASHKTFLVKPQNWCDSVHRFLKHCADAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVAEGRRFLLQANARELAAVLSTANNKRAWVTWNLPVPHPRLRLGTGSGCPLLSDYGCNVPASETHPASKFLSEWFVIRSGSLGPGMRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAECAPVERWLNDDGEDVAGDNGGGGDDVMMANS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02980 354 ProSiteProfiles Zinc finger MYND-type profile. 282 324 IPR002893 -
Phco2g02980 354 MobiDBLite consensus disorder prediction 335 354 - -
Phco2g02980 354 SUPERFAMILY F-box domain 12 81 IPR036047 GO:0005515
Phco2g02980 354 PANTHER MYND DOMAIN-CONTAINING 7 343 IPR044508 -
Phco2g02980 354 SUPERFAMILY HIT/MYND zinc finger-like 279 329 - -
Phco2g02980 354 Gene3D - 275 328 - -
Phco2g02980 354 Gene3D Tetratricopeptide repeat domain 84 222 IPR011990 GO:0005515
Phco2g02980 354 FunFam Predicted protein 272 329 - -
Phco2g02980 354 Pfam MYND finger 285 324 IPR002893 -
Phco2g02980 354 CDD F-box_SF 24 61 - -
Phco2g02980 354 SUPERFAMILY HCP-like 89 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02980 Phco-Chr2 58601727 58602993 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02980 2 58601727 58602993 Phco4g02017 4 40088261 40089961 PCT