Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02918 ATGGGGAGGGAGAAGGAAAATTCAAAGAATAAGCCAGCAGTCAACACAGCAAAAGGTGGTTACAGAAAGAGAGTGCCCAATCTCGCCGTCCTGCAGGAAAGAGGGAACAGGTTCAGGGTCTCACGTTCCTATGCAACACCAGAATACAACCTTGTCCTTCTGATCAGTGGGGCAGAGTTGTCCTCTTTTTCCTTATTGCTGGACTTGTCATTTGACTATGGCTTATTGATGTTTCCCAGAAATTTATTGGTTGCTCAGTTCAAAGTTGTGAGCTTTTGTCCTTTTGGTTATTATAGTTTGATTCCCTCGCAAAGTTATTTACATATATATAAACATGATGTGTGCGTTTTGGAGTTGCAGATAGAGACTTGGACAGTTTTGGTTGCTATTCTGTGCATCTTGGTGTTTATTGTGAAGGAGTTTGTTATGGGGGCCAAGAGTTCAAAAGAAAGTGGTAGGAGGTATGAGTTTGGTGCTTCTTCATCTTCATGGGATAATAATAATAATAATAATTATGGTGGATACTCCCCACAATCACCATATCCTTCTTATCAAACACCTCGGCACCAGCACGCATCTGCATCAACTCCATTTTATGATATTGCTCAGCCAAAAAGGAAGCTTGATAGGAAGTATTCAAGGATAGCTGATAATTACCGTTCCTTGGATGAGGTTACTGCTGAACTTGCAAATGCTGGGTTGGAATCTTCTAATCTCATTGTTGGCATTGATTTCACAAAGAGCAATGAGTGGACAGGGAAGAGGTCATTCAATCGAAAAAGTTTACATGATATTGGAAGTTGTCAAAACCCGTATGAGCATGCAATTTCTATTATTGGGAAAACTTTATCCGCTTTTGATGAGGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCTTCTACACATGATCAAGATGTATTTAGTTTCTTTTCGGAAGAGAGGTTCTGCAACGGATTCGAGGAAGTTCTATCACGATACAGAGAAATTACTCCTCACCTCAAACTTGCAGGACCCACTTCATTTGCCCCTATTATTGAAATGGGCATGACTATTGTTGAGCAAAGTGGTGGCCAATATCATGTCTTGCTGATAATTGCAGATGGACAGGTGACTAGAAGCGTTGACACACAACATGGCAACTTAAGTCCACAAGAGAAGAACACAATTGATGCAATAGTTAAAGCAAGTGAGTATCCACTATCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGATATGATGCGGGAATTTGATGATAACATCCCTGCTAGAGCATTTGACAATTTTCAGTTTGTGAATTTTACGGAAATAATGGCAAAGAATGTAGATTCAACTAGAAAAGAGACAGATTTTGCCCTTTCAGCTCTGATGGAGATACCTTCTCAGTACAAGGCAACCATAGAACTTGGCATATTGGGTGGACGGAGGGGACATTCACCAAATAGGGTTGCTCTACCCCCACCTCTTTATGGTAGGACTTCTTCCAGCATCAGCACAAAATCAACAAGGTCCAACAGTTTTCAGCAGAGGGTACCTACACGTACTAGCTATGACAACAGTGTTCACACGGAAGCATCTGCAAGTTCTTTATATGATAATAAGGTTTGCCCGATTTGTCTCACCAATGCGAAGGATATGGCCTTTGGGTGTGGGCATCAGACTTGTTGTGAGTGTGGAGAAGACCTCCAATTCTGCCCCATTTGCCGGAGAACGATCAACACTAGAATAAGGCTTTACTAG 1746 0.4147 MGREKENSKNKPAVNTAKGGYRKRVPNLAVLQERGNRFRVSRSYATPEYNLVLLISGAELSSFSLLLDLSFDYGLLMFPRNLLVAQFKVVSFCPFGYYSLIPSQSYLHIYKHDVCVLELQIETWTVLVAILCILVFIVKEFVMGAKSSKESGRRYEFGASSSSWDNNNNNNYGGYSPQSPYPSYQTPRHQHASASTPFYDIAQPKRKLDRKYSRIADNYRSLDEVTAELANAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHDIGSCQNPYEHAISIIGKTLSAFDEDNLIPCFGFGDASTHDQDVFSFFSEERFCNGFEEVLSRYREITPHLKLAGPTSFAPIIEMGMTIVEQSGGQYHVLLIIADGQVTRSVDTQHGNLSPQEKNTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKNVDSTRKETDFALSALMEIPSQYKATIELGILGGRRGHSPNRVALPPPLYGRTSSSISTKSTRSNSFQQRVPTRTSYDNSVHTEASASSLYDNKVCPICLTNAKDMAFGCGHQTCCECGEDLQFCPICRRTINTRIRLY 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02918 581 ProSiteProfiles Zinc finger RING-type profile. 538 571 IPR001841 -
Phco2g02918 581 SUPERFAMILY RING/U-box 531 577 - -
Phco2g02918 581 SUPERFAMILY vWA-like 238 420 IPR036465 -
Phco2g02918 581 Pfam Zinc finger, C3HC4 type (RING finger) 535 575 - -
Phco2g02918 581 MobiDBLite consensus disorder prediction 168 190 - -
Phco2g02918 581 MobiDBLite consensus disorder prediction 495 521 - -
Phco2g02918 581 Pfam Copine 261 473 IPR010734 -
Phco2g02918 581 PANTHER COPINE FAMILY PROTEIN 1 183 558 - -
Phco2g02918 581 SMART VWA_4 236 439 IPR002035 -
Phco2g02918 581 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 515 581 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02918 Phco-Chr2 58198595 58205562 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02891 4 50109234 50113437 Phco2g02918 2 58198595 58205562 PCT