Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02914 ATGAATTACATTGCTAGTGGATATATTTGTTGCCATATAAACTCCGTTGAACTTCGTGACGCAACAGGGGCGCCGGCAAAAGCAATCATGCAGTGTTTCTCCTTATCCTCCATCTCTCTTTTTATTTTCCTATGTCTATGTTTTGAGAGTGTGTGGACTAAAAATGTATCCGAGAGTGGCCGACAGGAAGCTAGCATTCCACCAAGAGGTTGGAACTCCTATGATTCCTTTTCCTGGACAATATCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAGCGTCTCCATGATCATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAGGAAAGTTGAGGGTGCTTATCATGATTCTCTTGGATTTGATGTGATTGATGAATGGGGGAGGATGCTTCCTGATCCAGGAAGGTGGCCTTCTTCTGAAAATGGGAAAGGATTTGCTGAAGTAGCTAATCGAGTACATGGCATGGGTTTAAAATTTGGGATTCATGTCATGAGAGGAATTAGCACACAAGCTGTAAACGCGAACACCCCTATCCTTGATACAAAAACGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGTATGCAAAAGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTGAATACAAAGTTGGGAGCAGGGAAAGCTTTTCTGAGATCCCTTTATGAGCAGTATGCTTCATGGGGTGTTGATTTTGTAAAACATGACTGTGTATTCGGGGATGACTTTGATTTAAATGAAATAAGCTATGTGTCTGAGGTTCTCAAGGAGTTTGATCGCCCCATTATATATTCTTTGTCTCCAGGAACTAGTGTGACACCAACCATGGCCAAGGATGTCAGTGGACTGGTCAATATGTATCGTATAACAGGAGATGACTGGGATACATGGAAGGATGTCAAATCACATTTTGATATTGCAAGGGATTTCTCAAATGCTAATATGATAGGAAATAAAGGTTTAATGGGGAAATCCTGGCCTGATTTGGACATGCTACCCTTTGGATGGCTAACTGATCCTGGTTCAAATGAAGGTCCACATAGGTTTAGTTACCTCAATCCGGAAGAAAAGAAGACACAGATGACTCTTTGGTCTATGGCAAAGTCTCCCCTTATGTATGGTGGGGATGTTCGGAAGATTGATCCTAGCACATATGATATTATCACAAATCCTACCCTTCTCGAGATTAATTCTTTTAGCTCATATAATATGGAGTTTCCTTTTATCACAAGTGTGAAGAGTGAAGATCGGGATCTTATGAGAAGAAGTGCCAAAGAAATAAAAACAACTTCCACGCATTCATTAGGCCTCACAAGGTGCACCGAGTCAAAGGCAAGGGGTTGGGCTAGTGAAAGTCTTAACCAATATCTTGAAAGAATATGCTGGAAAAGGAGTTTAGGAAACAAGCATCTTGCCCCCTTTTGTGTGGACAAAAGAGAACTTTACTTCCCATTAGATCAAGTGAGTATGTATCAAGGGAAACATCATTTAGTTGCACCAAGCAGAATAAAATTGTGCTTGGATGCTTCTCCGAAACGCAAGCTCACTTCTAAAGAGTTCAAGAGAGGGACATTTTCTCCCTGCAGGTGGGATTCAAATCAGATGTGGGAATTGAATCCTAATGGGACCCTGGTCAATAGTTATTCTGGTTTGTGTGCAACAGTGGAGTCTAGCGAAGATACTATTAATTCTGGTGGCTTGCGCTCTTGGATTGCGACAGGAAGAAAAGGAGAAGTCTATATTGCTTTCTTCAATCTAAGTGAACAGAAGACGGTAATATCTGCACAGGCATCTGACCTGGCCGAGTTCCTTCCTGGCAGAGACTTGAGTTCTTGTGAGGGCAGTGAAGTGTGGAGTGGAGATGCTGTAGAAATAACTGAAGGGACGTTATCAACAACAGTGGAAATGCATGGAAGTTCGCTAATTGTTCTGAATTGCAACTAG 1989 0.4198 MNYIASGYICCHINSVELRDATGAPAKAIMQCFSLSSISLFIFLCLCFESVWTKNVSESGRQEASIPPRGWNSYDSFSWTISEEEFLQSAEIVSQRLHDHGYEYVVVDYLWYRRKVEGAYHDSLGFDVIDEWGRMLPDPGRWPSSENGKGFAEVANRVHGMGLKFGIHVMRGISTQAVNANTPILDTKTGGAYQESGRVWYAKDIAIPERACAWMPHGFMSVNTKLGAGKAFLRSLYEQYASWGVDFVKHDCVFGDDFDLNEISYVSEVLKEFDRPIIYSLSPGTSVTPTMAKDVSGLVNMYRITGDDWDTWKDVKSHFDIARDFSNANMIGNKGLMGKSWPDLDMLPFGWLTDPGSNEGPHRFSYLNPEEKKTQMTLWSMAKSPLMYGGDVRKIDPSTYDIITNPTLLEINSFSSYNMEFPFITSVKSEDRDLMRRSAKEIKTTSTHSLGLTRCTESKARGWASESLNQYLERICWKRSLGNKHLAPFCVDKRELYFPLDQVSMYQGKHHLVAPSRIKLCLDASPKRKLTSKEFKRGTFSPCRWDSNQMWELNPNGTLVNSYSGLCATVESSEDTINSGGLRSWIATGRKGEVYIAFFNLSEQKTVISAQASDLAEFLPGRDLSSCEGSEVWSGDAVEITEGTLSTTVEMHGSSLIVLNCN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02914 662 CDD RICIN 519 575 IPR000772 -
Phco2g02914 662 PRINTS Glycosyl hydrolase family 27 signature 61 80 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 PRINTS Glycosyl hydrolase family 27 signature 370 391 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 PRINTS Glycosyl hydrolase family 27 signature 155 176 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 Pfam Alpha galactosidase C-terminal beta sandwich domain 580 659 IPR041233 -
Phco2g02914 662 SUPERFAMILY Ricin B-like lectins 519 585 IPR035992 -
Phco2g02914 662 Gene3D - 574 661 IPR013780 -
Phco2g02914 662 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 40 661 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 SUPERFAMILY (Trans)glycosidases 64 412 IPR017853 -
Phco2g02914 662 Pfam Alpha galactosidase A 80 175 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 Pfam Alpha galactosidase A 238 412 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 CDD GH27 67 412 IPR002241 GO:0004553|GO:0005975
Phco2g02914 662 Gene3D Aldolase class I 45 414 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02914 Phco-Chr2 58173680 58180139 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02898 4 50154547 50159821 Phco2g02914 2 58173680 58180139 PCT