Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02843 ATGGCCGATCACTCAGACTCTTCTCCTCTCGTCCCTCCCCTTCCTCTCACGGACCCTTCCGAGATCGACCTCGAAGCCGGTCCCTCCGAACAAATCCAATGCCGAATTTGTCTCGAAACCGATGGTAGAGATTTCATAGCCCCTTGTAAGTGCAAAGGTACATCAAAATACGTACACCGAGAATGTTTGGATCATTGGCGAGCAGTTAAGGAAGGATTTGCCTTTGCTCACTGCACTACGTGCAAGGCTCCTTACCATTTGCGTGTTCATGTTGCTGCTGATAGGAAATGGCGTACCCTGAAATTTCGGTTTTTTGTCACTAGAGACATTTTGTTTATTTTTCTGTCTGTCCAGCTTGTCATTGCGGCACTGGCATATTTGGTTTATCTAATAGATGGTTACCAGCAATATTGGCTTCGTCTTCTCTGGGGTTTTGATAGTGAAATGAGCTTTTACTACATATGTGGAGCTCTATTATTTTTCGCATTGCTTGGCCTTTCTGGGTGCTTCATTACTTGTTATGATCGAAGAGTTCGCAATGATTTAGCTCAGCCTTGTAGAGAATTATGTCTTTGTTGCTGTCAACCAGGAGTTTGTGCAGACTGTCATTTGCCAGGCACTCTTTGTATGTGGACTGATTGCACCACTTGCTTTGAGAGTTGTGGAACCATGGCAACTGAATGTGGTGGTTGTTTGGGGGGTGCCGGGGAAGCAGGGCTGCCATTGTTATTCATAATGGCTTTGGTTGTTCTGGGACTTTTTACTGTAATTGGGATATTCTACAGTGTATTGGTGGCTACCATGGTAGGTCAGCGGATATGGCAACGTCATTATCACATACTTGCAAAAAGGATGTTAACAAAGGAGTATGTGGTTGAAGACGTCGATGGAGAGCTGACAGGATCTGATTGGTCTCCCCCGGCTCTCCCTCCTGAGCATGTGCAGCAGTTGAAAACATTGGGCCTACTATGA 972 0.4568 MADHSDSSPLVPPLPLTDPSEIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRAVKEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILFIFLSVQLVIAALAYLVYLIDGYQQYWLRLLWGFDSEMSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCADCHLPGTLCMWTDCTTCFESCGTMATECGGCLGGAGEAGLPLLFIMALVVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGELTGSDWSPPALPPEHVQQLKTLGLL 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02843 323 Pfam RING-variant domain 34 81 IPR011016 GO:0008270
Phco2g02843 323 ProSiteProfiles Zinc finger RING-CH-type profile. 26 88 IPR011016 GO:0008270
Phco2g02843 323 CDD RING_CH-C4HC3_MARCH 34 82 - -
Phco2g02843 323 SMART ringv_2 33 82 IPR011016 GO:0008270
Phco2g02843 323 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 20 322 - -
Phco2g02843 323 SUPERFAMILY RING/U-box 29 86 - -
Phco2g02843 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 96 IPR013083 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco2g02843 Phco-Chr2 57695890 57701177 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02987 4 50993118 50996600 Phco2g02843 2 57695890 57701177 PCT