Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02815 ATGGAACCTGCCAAGACCATTCTCCACCATCACAAATACTCCTCCATCTTCTTAGCCATTTTCCTTCTCTTCACTTCACCATTCATGTCTTCAGCAAATGCCAAAATTCACGAGCATGAGTTTCTTGTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACACACAATGCCATCACTGTGAATGGCCAATTCCCCGGCCCAACGTTGGAAATCAACAATGGAGACACTTTAGTCGTCAAAGTCACCAACAAAGCTCGTTACAATGTCACAATCCATTGGCACGGTGTTAGGCAAATGAGAACAGGATGGGCGGATGGACCAGAATTTGTGACTCAGTGCCCCATTCGTCCTGGAGGAAGTTACACCTACCGTTTTACTGTTCAAGGACAAGAAGGGACACTTTGGTGGCACGCTCATAGCTCATGGCTAAGAGCCACCGTTTATGGTGCTTTAATCATTCTTCCTAGGGAAGGAGAACGCTACCCTTTCCCCAAGCCAAAGCACGAGACACCCATTCTTCTTGGGGAATGGTGGGACGCAAACCCTATTGATGTGGTGAGGCAGGCCAGACGAACTGGAGGAGCTCCTAACGTGTCTGATGCTTACACCATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCTACCAAAGATACTAGCATTGTTCCAATTCATGCTGGAGAAACAAACCTTCTACGTGTCATAAATGCTGCACTCAATCAGCCTCTCTTCTTTACCGTTGCAAACCACAAACTTACGGTGGTTGGCGCCGATGCCTCCTACCTCAAACCCTTCACCACCAAAGTCCTCATCTTGGGACCCGGCCAAACCACTGATGTCCTAATTACCGGCGACCAACCACCATCTCGCTACTACATGGCGGCGCGTGCATACCAATCTGCTCAAAACGCTGCGTTTGACAACACCACCACCACCGCAATATTGGAATACAAATCGCTTCACCATGGTAACCATTCTAAACATCATCATTCTAAAGGTGTGAAGAACAAAACGAAACCTATAATGCCTCCACTCCCTGCTTACAACGACACAAACACCGTCACTACTTTCAGCAGAAGCTTCAGAAGCCCCAGAAAAGTCGAGGTCCCCACTGAAATCGATCAAAGCCTTTTCTTCACAGTGGGCTTGGGACTCAACAAGTGCCCCAAAAACTTCAAAGCGAATAGGTGTCAGGGACCCAATGGGACGAGGTTCACTGCAAGCATGAACAACGTGTCTTTCGTGCTCCCCAACAACGTTTCTATCTTGCAGGCTCACTACCACGGAACCCCGGGAGTGTTCACCACCGATTTTCCGGGGAAGCCGCCGGTGAAGTTCGACTACACCGGCAACGTGAGCCGTTCATTGTGGCAACCTATTCCTGGGACTAAGGCTCACAAGTTGAAGTTCGGATCGAGGGTTGAGATTGTGTTGCAGGATACTAGCATTGTTACTCCTGAGAACCACCCTATCCATCTTCATGGCTATGATTTCTACATTGTTGCAGAGGGGTTCGGCAACTTCGACCCCAAGAAAGATAGGGCGAAATTCAACCTTGTTGATCCTCCTTTGAGGAACACAGTGGCTGTGCCTGTAAATGGATGGGCAGTTATTCGATTTGTTGCTGATAATCCAGGTGCGTGGCTTATGCATTGTCACTTGGACGTCCACATAGGGTGGGGTTTGGCCACGGTGTTGTTAGTGGAGAACGGTTTTGGGAAATTGCAATCCATAGAGCCTCCTCCAGTGGATCTGCCCCTTTGTTAG 1767 0.4867 MEPAKTILHHHKYSSIFLAIFLLFTSPFMSSANAKIHEHEFLVEATPVKRLCKTHNAITVNGQFPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIILPREGERYPFPKPKHETPILLGEWWDANPIDVVRQARRTGGAPNVSDAYTINGQPGDLYKCSTKDTSIVPIHAGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLILGPGQTTDVLITGDQPPSRYYMAARAYQSAQNAAFDNTTTTAILEYKSLHHGNHSKHHHSKGVKNKTKPIMPPLPAYNDTNTVTTFSRSFRSPRKVEVPTEIDQSLFFTVGLGLNKCPKNFKANRCQGPNGTRFTASMNNVSFVLPNNVSILQAHYHGTPGVFTTDFPGKPPVKFDYTGNVSRSLWQPIPGTKAHKLKFGSRVEIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDRAKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLMHCHLDVHIGWGLATVLLVENGFGKLQSIEPPPVDLPLC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02815 588 Pfam Multicopper oxidase 438 570 IPR011706 GO:0005507|GO:0016491
Phco2g02815 588 FunFam Laccase 167 366 - -
Phco2g02815 588 Pfam Multicopper oxidase 169 318 IPR001117 -
Phco2g02815 588 ProSitePatterns Multicopper oxidases signature 2. 551 562 IPR002355 GO:0005507
Phco2g02815 588 MobiDBLite consensus disorder prediction 323 349 - -
Phco2g02815 588 FunFam Laccase 25 155 - -
Phco2g02815 588 Gene3D - 386 588 IPR008972 -
Phco2g02815 588 NCBIfam laccase 34 588 IPR017761 GO:0046274|GO:0048046|GO:0052716
Phco2g02815 588 CDD CuRO_1_LCC_plant 39 155 IPR034288 GO:0005507
Phco2g02815 588 SUPERFAMILY Cupredoxins 369 588 IPR008972 -
Phco2g02815 588 PANTHER MULTI-COPPER OXIDASE 39 571 IPR045087 -
Phco2g02815 588 Pfam Multicopper oxidase 43 157 IPR011707 GO:0005507
Phco2g02815 588 ProSitePatterns Multicopper oxidases signature 1. 546 566 IPR033138 -
Phco2g02815 588 Gene3D - 167 366 IPR008972 -
Phco2g02815 588 SUPERFAMILY Cupredoxins 31 182 IPR008972 -
Phco2g02815 588 CDD CuRO_2_LCC_plant 171 317 IPR034285 -
Phco2g02815 588 Gene3D - 21 155 IPR008972 -
Phco2g02815 588 CDD CuRO_3_LCC_plant 433 571 IPR034289 GO:0005507
Phco2g02815 588 SUPERFAMILY Cupredoxins 163 364 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02815 Phco-Chr2 57506203 57509500 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02815 2 57506203 57509500 Phco3g00788 3 6538156 6541245 PCT