Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02755 ATGGAGGGAAAGGAGCAAGATGTTTCACTGGGAGCGAACAAATTCTCGGAGAGGCAACCCATTGGCACTGCGGCTCAGATCCAAGACGATGGAAAGGACTACAAAGAGCCTCCATCGGCTCCACTGTTCGACCCCTCCGAACTCACTTCTTGGTCCTTCTACCGAGCCGGAATAGCGGAGTTTGTAGCTACTTTTCTTTTCCTCTACATAACCATCTTAACCGTCATGGGTGTCAATAGGTCCGATTCCAAGTGCGCAACCGTTGGCATTCAAGGCATTGCTTGGGCCTTCGGTGGTATGATCTTTGCTCTCGTTTACTGCACCGCTGGAATCTCAGGGGGACACATTAACCCGGCTGTGACATTCGGACTCTTCTTGGCGAGGAAATTGTCGTTGACTAGGGCACTGTTCTACATGGTGATGCAGGTTCTGGGTGCTATAGTCGGTGCTGGTGTGGTCAAAGGTTTCGAGGGAAAAACATTCTTTGGCCAACACAACGGAGGTGCCAACTTCGTTGCCCCTGGTTACACAAAAGGCGATGGACTCGGTGCTGAGATTGTTGGCACCTTCGTTCTTGTCTACACCGTTTTCTCAGCCACTGATGCCAAGCGTAGCGCTAGAGACTCGCACGTTCCTATTTTGGCACCCTTGCCCATTGGGTTCGCTGTGTTCTTGGTGCACTTGGCCACCATCCCAATCACTGGCACTGGTATCAACCCTGCTCGAAGTCTCGGTGCTGCCATCATCTTTAACAAAGACCTTGGCTGGGATGATCACTGGATTTTCTGGGTTGGACCCTTCGTTGGAGCAGCTCTTGCGGCTCTTTACCACCAAGTCGTAATCAGAGCCATTCCCTTCAAATCCAACTAA 870 0.5138 MEGKEQDVSLGANKFSERQPIGTAAQIQDDGKDYKEPPSAPLFDPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSDSKCATVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQVLGAIVGAGVVKGFEGKTFFGQHNGGANFVAPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWDDHWIFWVGPFVGAALAALYHQVVIRAIPFKSN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02755 289 NCBIfam MIP family channel protein 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 MobiDBLite consensus disorder prediction 1 38 - -
Phco2g02755 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Phco2g02755 289 Gene3D Glycerol uptake facilitator protein. 40 288 IPR023271 -
Phco2g02755 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 285 IPR034294 -
Phco2g02755 289 FunFam Probable aquaporin PIP1-2 40 289 - -
Phco2g02755 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco2g02755 289 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02755 Phco-Chr2 57017799 57018968 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02755 2 57017799 57018968 Phco2g02755 2 57017799 57018968 ECH
Phco2g02755 2 57017799 57018968 Phco3g00718 3 5894022 5895677 PCT