Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02745 ATGACGGAGGAGCGGAACGTGCGAAAAACACGTGTGGTTGACGTGGTCCTCGACTGCGTCATACCCTACATCGACGACCCTAAGGACCGCGACGCCGTTTCCCAGGTGTGTCGACGCTGGTATGAGCTCGACTCCCTCACCCGGAAGCACGTCACCATCGCCCTCTGCTACACCACCACACCGGCGCGCCTCCGCCGCCGCTTCCCGCACCTTGAGTCGCTTAAACTGAAGGGGAAGCCCCGCGCCGCAATGTTCAACCTGATTCCCGAGGATTGGGGAGGCTACGTCACCCCATGGGTTAAGGAAATCTCTCAGTACTTCGATTGCCTGAAGAGCCTCCACTTCCGCCGCATGATTGTCACCGATTCCGATCTTCAGCTCCTCGCTCGCTCCCGAGGTCACGTGCTGCACGCTCTCAAGCTTGACAAGTGCTCCGGTTTCTCTACCGATGGACTTCTCCATATTGGTCGCCTTTGCAAGAATTTAAGAGTGTTGTTTCTGGAGGAAAGCTCAATTGTTGAGAACGACGGAGAATGGCTACACGAGCTTGCTTTGAATAATACAGTTCTTGAGGATCTCAATTTTTACTTGACAGACATTGCTTTTATAAGGAATCAGGACCTTGAACTTCTGGCTAAAAATTGCCCCAATTTAGTGTCAGTGAAACTTACTGATTGTGAAATACTGGATCTTGTGAACTTCTTTACGCATGCCTCTACTCTGGAAGAGTTTTGCGGAGGCACCTACAACGAGGAACCAGAAAATTACTCTGCTATATCATTGCCACCAAAGTTATGTCGATTGGGTTTAACATATATTGGAAAGAATGAGTTGCCCATAGTGTTCTTGTTTGCAGGCGTACTAAAAAAATTGGATCTCCTCTATGCAATGCTCGACACGGAGGATCATTGTATCTTAATCCGAAAGTGCCCAAATCTGGAAGTCCTTGAGACGAGGAATGTAATTGGCGATAGAGGTTTAGAAGTTCTTGGTCGGTGTTGTAAGAGGCTAAAAAGGCTTAGGATTGAAAGGGGTGATGATGATCAAGGAATGGAAGATGAAGAAGGTACTGTGTCCCATAGAGGGCTAATAGCCTTGTCACAGGGCTGTTCAGAGCTTGAATACATGGCTGTTTACGTGTCAGATATTACAAATGCATCTCTGGAACATATAGGAACTCACTTGAAAAAACTATGCGATTTTCGCCTAGTGTTACTTGATCATGAAAAGAAAATAAGTGATTTGCCACTTGACAACGGAGTGAGGGCTCTTCTGAGGGGCTGTGAGAATCTGAGAAGATTTGCTCTATATCTGAGGCGAGGGGGGTTGACTGATGTAGGTCTTGGTTACATAGGGCAGTACAGTTCAAATGTTAGATGGATGCTGCTGGGTTATGTGGGGGAGTCTGATGCAGGGCTTTTGGAATTCTCAAAGGGGTGTCCTAGTCTTCAGAAACTTGAAATGAGAGGGTGTTCTTTTTTCAGTGAGCGTGCACTTGCTGTGGCTGCAACGCGATTAACTTCTCTAAGGTACTTGTGGGTGCAAGGATATGGAGCATCTCCATCTGGGCGTGATCTTTTGGCAATGGCTCGCCCCTTTTGGAACATTGAGTTGATTCCTTCTAGAAAGGTGCCTATGAATAACCATCAGGATGAGACGGTAGTTGTAGAGCATCCAGCTCATATTCTTGCATATTATTCTCTTGCAGGCCAGAGATCAGATTTTCCAGATACTGTTGTGCCTTTGGACACTGCCACGTGTGCTGTTGATGCCTAG 1776 0.4735 MTEERNVRKTRVVDVVLDCVIPYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGYVTPWVKEISQYFDCLKSLHFRRMIVTDSDLQLLARSRGHVLHALKLDKCSGFSTDGLLHIGRLCKNLRVLFLEESSIVENDGEWLHELALNNTVLEDLNFYLTDIAFIRNQDLELLAKNCPNLVSVKLTDCEILDLVNFFTHASTLEEFCGGTYNEEPENYSAISLPPKLCRLGLTYIGKNELPIVFLFAGVLKKLDLLYAMLDTEDHCILIRKCPNLEVLETRNVIGDRGLEVLGRCCKRLKRLRIERGDDDQGMEDEEGTVSHRGLIALSQGCSELEYMAVYVSDITNASLEHIGTHLKKLCDFRLVLLDHEKKISDLPLDNGVRALLRGCENLRRFALYLRRGGLTDVGLGYIGQYSSNVRWMLLGYVGESDAGLLEFSKGCPSLQKLEMRGCSFFSERALAVAATRLTSLRYLWVQGYGASPSGRDLLAMARPFWNIELIPSRKVPMNNHQDETVVVEHPAHILAYYSLAGQRSDFPDTVVPLDTATCAVDA 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02745 591 Pfam Transport inhibitor response 1 protein domain 69 115 IPR041101 -
Phco2g02745 591 Gene3D Ribonuclease Inhibitor 49 586 IPR032675 -
Phco2g02745 591 SMART LRR_CC_2 428 454 IPR006553 -
Phco2g02745 591 SMART LRR_CC_2 107 131 IPR006553 -
Phco2g02745 591 SMART LRR_CC_2 480 505 IPR006553 -
Phco2g02745 591 SMART LRR_CC_2 133 158 IPR006553 -
Phco2g02745 591 SMART LRR_CC_2 370 394 IPR006553 -
Phco2g02745 591 SUPERFAMILY RNI-like 87 342 - -
Phco2g02745 591 SUPERFAMILY RNI-like 277 528 - -
Phco2g02745 591 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 28 246 - -
Phco2g02745 591 CDD F-box_AtTIR1-like 14 48 - -
Phco2g02745 591 Pfam F-box 10 50 IPR041567 -
Phco2g02745 591 FunFam Coronatine-insensitive protein 1 49 585 - -
Phco2g02745 591 Gene3D - 2 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02745 Phco-Chr2 56933614 56937631 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02745 2 56933614 56937631 Phco2g02745 2 56933614 56937631 ECH
Phco2g02745 2 56933614 56937631 Phco3g00709 3 5781144 5785812 PCT