Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02711 ATGCCAAGGAGGTTGCTCGGGTACGCTTATTTCTTTGATTTGAAACTGTTCACGGGTGGACTCTCTTTCTTCTCTGCCAACCGCACCCAAGAAGAACAACACTTTGCTTGTCAGAATATGGAGAACGCAGATCCTAATAGACATTTTCTCAAAGATGTTAAGCGCATCGTCATCAAGGTTGGGACTGCTGTGGTTACTCGCCAAGATGGAAGGTTGGCGGTTGGAAAATTAGGGGCACTATGTGAGCAGATTAAGGAGCTGAACTCTCTTGGTTATGAGATTATTTTGGTGTCATCAGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATACAGAAAATTAATCAACAGCAGCTTTGCTGACCTTCAGAAGCAGCAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAGAGCAGTCTTATGGCTCTTTATGATGCTTTGTTTAGTCAGCTAGATGTGACATCTGCTCAGCTTCTTGTGACAGACAATGATTTTCGAGACAAAGATTTCAGAAAGCAACTCAGTGAAACTGTGAAATCACTGTTAGGATTAAAAGTTATTCCCATATTCAACGAGAACGATGCAGTTAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGCATATTTTGGGATAATGACAGTTTATCAGCTTTATTGGCACTGGAATTAAAAGCTGATCTTCTTATTTTGTTGAGTGACGTCGAGGGTCTTTATAGTGGCCCTCCGAGTGATCCAGGCTCAAAGCTTATTCATACATACATTAAAGAAATACATCAAAATGAAATTACTTTTGGAGACAAGTCTAGAGTGGGAAGAGGTGGTATGACTGCCAAAGTAAAGGCTTCTATTCATGCAGCTGAAGCTGGCATTCCTGTTATCATTACCAGTGGTTATGCAGCTGAAAATATCCTTAATGTTCTCCACGGACAACGTATTGGAACCCTCTTCCATAAAGATGCCCATAAATGGGCCCCAATAAAAGAGGTTAACGCTCGCGAGATGGCAGTTGCAGCTAGGGACTGTTCCAGAAGGCTTCAGGCCATGTCTTCAGAAGAGAGGAAACAAATTTTACTAAAAATAGCTGATGCTTTGGAATCACATCAAGAAGAGATCAGGATTGAAAATGAAGCTGATGTTGCCACTGCACAAGAAGAAGGATGTGAAAAATCCTTGGTGGCTAGGCTGTTTTTAAAGAAGGAGAAGCTTGCAAGCCTTGCAAACAACATTCGAATTATTGCAAACATGGAAGATCCAATTGGTCGAGTGCTAAAACGAACTGAGCTCGCGGAAGGGCTGATTTTGGAGAAAACATCATCTCCTTTAGGTGTTCTTTTAATTGTTTTTGAGTCTCGCCCTGAAGCACTAGTGCAGATAGCTTCTTTGGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAAGGAGGCAAGGAGGCCAAGAGATCAAATGCAATTTTGCACAAAGTTATTACTGAAGCCATACCAGATTCTGTCGGTGCAAAACTTATTGGACTTGTGACATCAAGAGCAGAAATTCCTGAGTTACTCAAGTTGGATGATGTAATTGATCTGGTGATTCCAAGAGGCAGCAACAAACTTGTCTCTCAGATCAAGAGTTCGACTAAAATTCCTGTTCTGGGTCATGCTGATGGAATTTGTCATGTCTATGTTGATAAATCTGCTGATTTGGAGATGGCAAAGAAGATTGTACTGGATGCAAAAATAGATTATCCAGCAGGTTGCAATGCCATGGAAACACTTCTTGTTCACAAGGACTTAGTAGAGAAAGGTTGGCTCAATAATATTACTGTTGACCTACGGACAGAAGGTGTTACATTGTTCGGAGGACCGAAGGCAAGTCCGTTGTTAAATATCCCACTGGCTCGTACATTACATCTCGAGTACAATTCATTGACATGCACAGTTGAAATCGTGGATGATGTTTATGCAGCTATCGATCATATAAATCTTTATGGAAGTGCACATACTGATTCCATTGTTACAGAAGATCATGAAGTAGCTGATGTATTTCTACGTCAAGTTGACAGTGCTGCTGTTTTTCACAATGCTAGTACAAGATTCAGTGATGGGGCACGATTTGGTCTAGGGGCAGAGGTGGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCAGTAGGAGTTGATGGATTGTTAACAACCAGATGGATTCTCAAAGGAAGTGGACAGATAGTGGATGGTGACAAAGCAATTAGCTACACCCACAAAGACCTTGCTATTTGA 2265 0.4203 MPRRLLGYAYFFDLKLFTGGLSFFSANRTQEEQHFACQNMENADPNRHFLKDVKRIVIKVGTAVVTRQDGRLAVGKLGALCEQIKELNSLGYEIILVSSGAVGLGRQRLRYRKLINSSFADLQKQQVELDGKACAAVGQSSLMALYDALFSQLDVTSAQLLVTDNDFRDKDFRKQLSETVKSLLGLKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVEGLYSGPPSDPGSKLIHTYIKEIHQNEITFGDKSRVGRGGMTAKVKASIHAAEAGIPVIITSGYAAENILNVLHGQRIGTLFHKDAHKWAPIKEVNAREMAVAARDCSRRLQAMSSEERKQILLKIADALESHQEEIRIENEADVATAQEEGCEKSLVARLFLKKEKLASLANNIRIIANMEDPIGRVLKRTELAEGLILEKTSSPLGVLLIVFESRPEALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPDSVGAKLIGLVTSRAEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSADLEMAKKIVLDAKIDYPAGCNAMETLLVHKDLVEKGWLNNITVDLRTEGVTLFGGPKASPLLNIPLARTLHLEYNSLTCTVEIVDDVYAAIDHINLYGSAHTDSIVTEDHEVADVFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVDGLLTTRWILKGSGQIVDGDKAISYTHKDLAI 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02711 754 SUPERFAMILY ALDH-like 334 738 IPR016161 GO:0016491
Phco2g02711 754 CDD AAK_P5CS_ProBA 47 320 IPR041744 -
Phco2g02711 754 PRINTS Glutamate 5-kinase family signature 175 196 IPR001057 GO:0005524|GO:0016301
Phco2g02711 754 PRINTS Glutamate 5-kinase family signature 214 241 IPR001057 GO:0005524|GO:0016301
Phco2g02711 754 PRINTS Glutamate 5-kinase family signature 273 293 IPR001057 GO:0005524|GO:0016301
Phco2g02711 754 PRINTS Glutamate 5-kinase family signature 91 105 IPR001057 GO:0005524|GO:0016301
Phco2g02711 754 PRINTS Glutamate 5-kinase family signature 135 163 IPR001057 GO:0005524|GO:0016301
Phco2g02711 754 NCBIfam glutamate-5-semialdehyde dehydrogenase 341 728 IPR000965 GO:0004350|GO:0006561
Phco2g02711 754 Hamap Gamma-glutamyl phosphate reductase [proA]. 333 739 IPR000965 GO:0004350|GO:0006561
Phco2g02711 754 SUPERFAMILY Carbamate kinase-like 54 319 IPR036393 -
Phco2g02711 754 FunFam Delta-1-pyrroline-5-carboxylate synthase 551 697 - -
Phco2g02711 754 PIRSF P5C_synthetase 19 754 IPR005766 GO:0003824|GO:0006561
Phco2g02711 754 ProSitePatterns Glutamate 5-kinase signature. 271 288 IPR019797 GO:0004349|GO:0006561
Phco2g02711 754 Pfam Amino acid kinase family 54 299 IPR001048 -
Phco2g02711 754 Hamap Glutamate 5-kinase [proB]. 54 323 IPR005715 GO:0005737|GO:0006561
Phco2g02711 754 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 40 753 - -
Phco2g02711 754 NCBIfam glutamate 5-kinase 54 325 IPR005715 GO:0005737|GO:0006561
Phco2g02711 754 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 646 667 IPR020593 GO:0004350|GO:0006561
Phco2g02711 754 Gene3D - 43 327 IPR036393 -
Phco2g02711 754 FunFam Delta-1-pyrroline-5-carboxylate synthase 43 326 - -
Phco2g02711 754 Pfam Aldehyde dehydrogenase family 330 597 IPR015590 GO:0016491
Phco2g02711 754 CDD ALDH_F18-19_ProA-GPR 335 735 IPR000965 GO:0004350|GO:0006561
Phco2g02711 754 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 343 737 IPR016162 GO:0016491
Phco2g02711 754 NCBIfam delta l-pyrroline-5-carboxylate synthetase 47 754 IPR005766 GO:0003824|GO:0006561
Phco2g02711 754 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 551 697 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02711 Phco-Chr2 56650298 56659652 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02711 2 56650298 56659652 Phco2g02711 2 56650298 56659652 ECH
Phco2g02711 2 56650298 56659652 Phco3g00660 3 5320028 5327727 ECH
Phco2g02711 2 56650298 56659652 Phco3g00660 3 5320028 5327727 PCT