Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02693 ATGCCCTTTACAAGCTACCCTGCTAAACATTTTGTGCTGCTGAAAGGCTTGAAAACGTTGTTTAGTTTGCTTAATTCAGGCTTTTGTTCTTCTCATTCTCAACATTCTTTTAATAAATGTGAACCTGATCCTTTTGTAAAAATAGGACACCTAAAGATGCAAATGCAAACTGGTCTTAATGCGATAGAGGATCAATATGAGCAATGTGAGGCGAAATATCCAAACAAAACTGCTATAGCATGCATGATAAATGCAGAAATTAGTGCTGTGTTGGCAGTTATGCGAAGAAATGTTAGATGGGGAGTTCATTACATGTTAGATGATGACCAGTCAGAGCACTTCCTTGTTCAGTCATTAAAGACGCTGAGGAGGCAAATTTTCTCATGGCAGAATCAATGGCATACCGTCAACCCTGCGTTGTATCTCCAGCCTTTTTTGGATGTGATACGATCCGATGAAACTAGTGCGCCTATTACTGGTGTTGCTTTGTCATCTGTTTACAAAATCTTAACTCTAGATGTGATTGATCAGCACACAGTCAACGTAGGGGATTCCATGCACTTGGTGGTTGATTCCGTCACTAGTTGCAGATTTGAAGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTGCAAGTTCTTCTAGCTTGTGTGAAAGGTAAAGCATCTGTAATGCTGAGTAACCAACACATTTGCACCATAGTGAATACTTGTTTCCGGATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAACGAATAGCACGGTACACAATGCATGAACTGGTTAGGTCTATATTTTCTCACCTTCAGAATATTGACAACACAAAGTGTGGATTCATAAATGGGAGCGCTACCTTAAAGCAAGTGAACAATGGACTGAATAATGAGCATGCTTTGGCAAGCAGAGAATTGGAAAATGAGAGGCTTAATTCTGCACATGATGCCCAACCATTATCTACAGTCACTGGTTCCGGCATTGCAACTGTTGTGACAGCAAATGTTGTGGATGAAAACACAGCCATGAATTACAACAAGACTGAGCCACACGAATTACAGCTCATGACTGATGGGGTTCCATGTATGGTGGAAATATTTCACTTCTTGTGTTCTCTGCTGAATGTCACTGAGCATATGGGAGTGAATCCTAGACCAAACACAATGACGTTTGATGAAGATGTGCCTCTTTTTGCGTTAACTTTGATTAATTCAGCCATAGAGTTGGGAGGGCCATCCTTCCGCCATCACCCAGGACTGCTGAGTTTAATTCAGGATGAATTATTCTACAATCTTATGCAATTTGGTTTATCAATAAGCCCTCTTGTACTTTCAATGGTGTGTAGCATTGTTCTCAATTTATATCAACATCTTCGTCAAGAACTCAAACTACAGCTAGAAGCATTTTTTTCTTGCGTAATTTTGAGGCTTGCACAAAGCAAATATGGTGCCTCATATCAGCAACAGGAGGTTGTGATGGAAGCACTTGTTGATTTTTGCAGGCAAAAAACATTCATGGTGGAGATGTATACCAACTTTGACTGTGACATAAGTTACAGTGATGTCTTTGAAGATATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACAATCCATTGTCTTCCATACACATTCTTGCCTTAGATGGTCTTATTGTTGTAATGCAGGGAATTGCCGAAAGACTAGGTAGTGGATCTTTAAGTTCAGAACAATCTCCTGTAAATTTTGAGGAGTATACACCATTCTGGATGGAAAAGTGTGACAGTTTTGCTGACCCAAATGATTGGGTTCCTTTTTTCCGCCAAAGAAAGTACATAAAGAGAAAATTAATGATTGGAGCTGATCACTTCAATCGGGATAGTAAGAAAGGTCTTGAGTTTCTCCAAGGAGCACATCTTTTGCCTAACAAACCTGATCCCCAAAGTGTTGCGTGCTTTTTAAGATACACAGCTGGGTTGGATAAGAATCTCATTGGTGATTTCCTTGGAAATCATGAAGAATTCTATGTTCAGGTTCTTCATGAATTTGCTAAGACATTTGATTTCCATGATATGACCTTAGACACAGCCCTGCGTGTACTTTTGGAGACTTTTAGGCTTCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCACCAGATATCTTAGCTAACAAGGATGCTGCTCTCGTGCTATCATACTCAATTATATTGCTTAATACAGATCATCATAATGTGCAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCATATAAATGATGGCAATGATCTGCCCCGAGAATTTCTGTCAGAGATTTACCATTCAATTTGTAAGAATGAAATTCGCACCACTCTTGAACCAGGCTTTGGATTTCCTGAAATGACCCCAAGTCGATGGATTTCTCTGATGCACAGGGCAAATAAAACTGCTCCATACATTGTATCGGATTCCAGAGCATACTTAGATTATGATATGTTTGTGTTGTTGTCAGGCCCAACAATTGCTGCCATTTCTGTGGTTTTTGATAATGCTGAAAATAAAGAGGTATATCAAAGATGTATGGATGGATTCTTAGTTGCTGCTAAGATATCAGCCTACTATCATCTTGAAAATGTACTTGATGATCTGGTTGTGTGCCTCTGTAAGTTCGTTACCGTTTTGGATCCATTATCGGTTGACGATTCTGTCCTGGCCTTTGGAGATGACACAAAAGTAAGAATTGCAACTGAGACAGTATTCACCATTGCAAATAGGTATGGTGATTACATCCGCACAGGGTGGAGGAATATTCTTGATTGCATTTTAATATTTTACAAGTTAGGTCTCCTTCCTACTCACTTGGCCAGTGATGCAGCTGACGAGTCACAGGTAACTACAGAAATTGGACATGGAAAATCTACCTCAAATTCTTTATTATCATCTAATCTTCAATATATTGCTCCAAAGAGATCCTCAGGATTAATTAGCAGGTTTAGTCAACTCTTATCACTTGGCTCTGAAGAGATAAGATCAATACCGACAAAAGAACAGCTGGTTGCTCATCAGCAAGCTACACAAGCAATTCAAAAGTGTCACATTGATAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGAATCTTGAAAGAGCACTCATCAATGCTGGATCTCAACATCTGAAAGGAAACAGAATGTCTGAGGATGAAGAGTCTTCAGTTCTCTGCCTGGAGTTATTGGTGGCAATCACTCTGAATAACAGGGATAGAGTTGTACTTCTTTGGAAGGGTGTTTATGATCACATATCCAATATTATTCAGTCAACTTTGATGCCTTGTGCTCTGGTAGAGAAGGCTATTTTTGGACTTCTTAGAATTTGCCACCGCTTACTTCCCTACAAAGAGAACATTACTGATGAACTTTTGAGGTCCCTGCAACTTGTCTTGAAGCTTGACGCACTAGTTGCAGATTCATACTATGAGCAGATTACACAGGAAGTCGGTTTCCTTGTGAAGGCAAATGCTTCTCATATTAGATCTCAGTCTGGATGGTGGACTATTACTGCTCTGCTCTCAATTACTTCTAGACACCTGGAATCATCTGAGGCTGGATTTGATGCACTGTTGTTCATTATGTCTGATGGAGCTCACTTGCTCCCTGCTAATTACATCCTATGCGTTGATGCTGCGAGACAGTTTGCTGAGTCTCGTGTGGGGCAGGTAGATCGATCTATAATTGCACTAGATCTTATGGTAAGTTCTGTCAATTCCTTAGAAAGATGGTCGAGTAATGCTAAGAAAGCTGCGAAAGAAGAGGAAGTGGAAAAGATGTTACAGGATATTGAGGAAATGTGGTTCAGGCTAGTGCAGGGACTGGGGAAAGTATGTTTGGACCAGAGAGAGGAGGTTAGAAACCATGCTTTGTTATCTTTACAGAAGTGCTTAAAAGGAGCTGTTGGGGCTCACATCCCGGGTGATTTGTGGTTGACATGTTTTGATAAAGTGATCTTCATTGTGCTCGAAGACCTGATTGAAATTGCGGAGTCGCATTCTCAAAAGGTGTACCCAAACGTGGAAGGAACTCTTGTTATTGCCTTAAAGCTTATGTCTGAAGTTTTCCTTCAGTTACTCCAAGAACTATCACAATTGGCAGCCTTCTGCGAACTATGGGAGGGTATGCTAAGCTGTATGGAAAAGTGTGCGAAGATGAAATTTAAAGGAAGAAGAAGTGAGAAGCTTCAAGTGCTTGTGCCTGAGCTTCTGAAGAACACTTTGCTTGTTATGAAATCTGGGGGCATACTAGTGCAGATTAATAATGGTTCGGGAGAAAATAGTTTGTGGGAACTGACATGGCTACACATGAAGAATATTGCTCCCTCATTGCACTCTGAGGTGTTTCCTGAGCAAGATCCAGAGCAGCTACAACACAAACAGGTTAAAGCAGTTGAAAGTTTGGGACCTGATGCAAACATTTCTGATCCTTCAAATGAAAAAGAGGGCCAAGATGGAGTTGAGATCAGTTAA 4548 0.4019 MPFTSYPAKHFVLLKGLKTLFSLLNSGFCSSHSQHSFNKCEPDPFVKIGHLKMQMQTGLNAIEDQYEQCEAKYPNKTAIACMINAEISAVLAVMRRNVRWGVHYMLDDDQSEHFLVQSLKTLRRQIFSWQNQWHTVNPALYLQPFLDVIRSDETSAPITGVALSSVYKILTLDVIDQHTVNVGDSMHLVVDSVTSCRFEVTDPGSEEVVLMKILQVLLACVKGKASVMLSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRSIFSHLQNIDNTKCGFINGSATLKQVNNGLNNEHALASRELENERLNSAHDAQPLSTVTGSGIATVVTANVVDENTAMNYNKTEPHELQLMTDGVPCMVEIFHFLCSLLNVTEHMGVNPRPNTMTFDEDVPLFALTLINSAIELGGPSFRHHPGLLSLIQDELFYNLMQFGLSISPLVLSMVCSIVLNLYQHLRQELKLQLEAFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMVEMYTNFDCDISYSDVFEDIANLLSKSAFPVNNPLSSIHILALDGLIVVMQGIAERLGSGSLSSEQSPVNFEEYTPFWMEKCDSFADPNDWVPFFRQRKYIKRKLMIGADHFNRDSKKGLEFLQGAHLLPNKPDPQSVACFLRYTAGLDKNLIGDFLGNHEEFYVQVLHEFAKTFDFHDMTLDTALRVLLETFRLPGESQKIHRVLEAFSERYYEQSPDILANKDAALVLSYSIILLNTDHHNVQVKKKMTEEDFIRNNRHINDGNDLPREFLSEIYHSICKNEIRTTLEPGFGFPEMTPSRWISLMHRANKTAPYIVSDSRAYLDYDMFVLLSGPTIAAISVVFDNAENKEVYQRCMDGFLVAAKISAYYHLENVLDDLVVCLCKFVTVLDPLSVDDSVLAFGDDTKVRIATETVFTIANRYGDYIRTGWRNILDCILIFYKLGLLPTHLASDAADESQVTTEIGHGKSTSNSLLSSNLQYIAPKRSSGLISRFSQLLSLGSEEIRSIPTKEQLVAHQQATQAIQKCHIDSIFTESKFLQAESLLNLERALINAGSQHLKGNRMSEDEESSVLCLELLVAITLNNRDRVVLLWKGVYDHISNIIQSTLMPCALVEKAIFGLLRICHRLLPYKENITDELLRSLQLVLKLDALVADSYYEQITQEVGFLVKANASHIRSQSGWWTITALLSITSRHLESSEAGFDALLFIMSDGAHLLPANYILCVDAARQFAESRVGQVDRSIIALDLMVSSVNSLERWSSNAKKAAKEEEVEKMLQDIEEMWFRLVQGLGKVCLDQREEVRNHALLSLQKCLKGAVGAHIPGDLWLTCFDKVIFIVLEDLIEIAESHSQKVYPNVEGTLVIALKLMSEVFLQLLQELSQLAAFCELWEGMLSCMEKCAKMKFKGRRSEKLQVLVPELLKNTLLVMKSGGILVQINNGSGENSLWELTWLHMKNIAPSLHSEVFPEQDPEQLQHKQVKAVESLGPDANISDPSNEKEGQDGVEIS 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02693 1515 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 122 1479 - -
Phco2g02693 1515 FunFam ARF guanine-nucleotide exchange factor GNOM-like 686 804 - -
Phco2g02693 1515 Pfam Sec7 domain 611 794 IPR000904 GO:0005085|GO:0032012
Phco2g02693 1515 Gene3D - 687 801 IPR023394 -
Phco2g02693 1515 Coils Coil 295 315 - -
Phco2g02693 1515 CDD Sec7 611 794 IPR000904 GO:0005085|GO:0032012
Phco2g02693 1515 SMART sec7_5 607 794 IPR000904 GO:0005085|GO:0032012
Phco2g02693 1515 Gene3D - 604 686 - -
Phco2g02693 1515 Coils Coil 52 72 - -
Phco2g02693 1515 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 364 522 IPR032691 -
Phco2g02693 1515 ProSiteProfiles SEC7 domain profile. 603 792 IPR000904 GO:0005085|GO:0032012
Phco2g02693 1515 MobiDBLite consensus disorder prediction 1476 1515 - -
Phco2g02693 1515 SUPERFAMILY Sec7 domain 607 797 IPR035999 GO:0005085|GO:0032012
Phco2g02693 1515 FunFam ARF guanine-nucleotide exchange factor GNOM 604 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02693 Phco-Chr2 56537957 56544117 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00646 3 5234375 5241556 Phco2g02693 2 56537957 56544117 PCT