Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02667 ATGTCTGTTACTTATGTTGTTCACCATTTGCAAAGTTTGTCAAGTTGCAAGAACACTCAGAATCAAGGTCACTTCTTCTTCTATATCACTTACACAATGCCCTTCATCTCCAAAATTCAGCGCCAATCTGATTACACTCTTTTCAGCTCTGCCACTCCCATTGTCATTGACAATGGTGCCTCCTACTTCCGTATTGGATGGGCAGGAGAGACTCAACCACGTGTTGTTTTCCGCAACATTGTCCAAAGGCCACGCCACAAAGCCACTGGAGAAACTGTCACTGTTGTTGGTGACCATGATCCAGCATTAATGAAATACTTTGACTGTAGTCGCTCTGGACCCCGCTCAGCGTTTGACAGCAATGTAGTTTACCAATTTGAAATGATGGAATATATTTTGGACTTTGGATTTGATCGGTTAGGAGCAACAGGATCAGAGATTGATCATCCTGTCCTGATCACAGAATGTGTATGCAACCCAATTCAGTCTCGTAGTAAAATGGCAGAACTTCTTTTTGAGACATATGGAGTTCCGTCTATAGCCTTTGGTGTTGATGCAGCATTCAGCTATAAATACAATCAACAACATGGTGTTTGTGATAAAGATGGTCTTGCTTTATGTCCAGGATTCAATACAACTCATGTGATTCCGTTTGTAGATGGGGAGCCTATATATAAAGGATGCTGCCGAACCAATGTTGGTGGGTTCCATGTGACTGATTATTTAAAGCAACTTCTTTCACTTAAATATCCTTATCATATGGCTAGATTTACATGGGAAAAGGTTGACGACCTGAAGATGGAACATTGTTATATTGCACCAGATTATGCTTCTGAAGCTCGACTGTTTCAGAAAAAATCTAATGAGGCTAAAGAAAAAACCAGATGTTGGCAGCTCCCTTGGGTTCCACCCCCTACTGAGGAGCCTCCTTCTGAGGAAGAGATTGCTAGAAAGGCAGCAATAAGAGAGAGACAGGGTCAAAGATTACGAGAAATGGCTGAGGCAAAGAGGTCCTCTAGAATAAACGAATTGGAAAATGAATGGCATGGTTTGGAATTTCTTCTAAAACAGCTTGAACAAGTTGAAGACAATGATATTCCATCTTTCCTAGCAGAGACTGGTTATGTCTCTAGGCAGGAGATAGAATCTGCCCGCACTAAAGTTACTCAATCTTTACGTAAAGCAAAAGGTGAACCAAAGAGTGAACAAGCTGAAACTGAAAAGGCTGACTCTGCCACTAATGAAAAGTATTCTCTTATAAACATCCCTGATGACATGCTCTCCCCTGAACAGATAGCTGAAAAAAAGAAACAGTTGTCACTGAAATCCATGTCAGATGGACGACAGCGATTGAAGCAGAAGCGTTATCAAGAGGAATTGGAGCGAGAAAGGAAACAACAGTTAGAGGAGGAAAAACGCCTAGAGAACCCAGAGCTTTACTTGGAACAATTGCGTGCCAAGTACAAAGACCTTTCAGAGAAAGTTGAGCAGCGAAAACGGCTCAAGACAAATGGAGATCATTCTAATGGAAATAACTTGTCTGGTGGCATTGGTCGTGGTGAGAGACTCCATGCTGCTCAGAGGGAGAGAATGCGCCTCTTAACTACTGCTGCCTTCGATCGTGGTAAGGGCGAAGATACATTTGGTGCCAAAGATGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATGATGATGGTGACGAGGGAGCAGATGAGAATGACACTGAGCTAGCTCGCATCTCTTCCAAGCTACAGGAGTTGGATCCAACTTTTGTGCCCAAATCAGAAACTGGTAGCTCTCAATCTGCTGAGGCGTCACGTGCCCCTCCTCTAACCAAAGAAGATTTTCAAATTGCTTTTGGTGTTGAAAGGTTCCGATGCCCTGAAATTTTGTTCAATCCAAACTGGATCGCAGTTGATCAAGCAGGGTTAGATGAGATGGCCGGGGTCTCAATAAGAAGGTTATCATGTAAGGATGAAGGCCTAGAAGAGAGACTCACTAACTCCATACTTGTGACTGGTGGAAGTTCTATTTTCCCCGGCATCATTGAACGCCTTGAAGCCGGAATTAGGATGATTCGACCATGTGGATCACCCATTAAAGTAGTTAGAGCATTGGATCCTGTTATGGATGCATGGCGTGGGGCTGCTGCATATGCAACAATCCCACTATTCCATACCCAAACCTTCAGTAGGATGGACTATTTTGAAAAGGGTGAAGACTGGCTCCGGAGTTATCAACTCAAATATTCGTTGTAA 2262 0.4297 MSVTYVVHHLQSLSSCKNTQNQGHFFFYITYTMPFISKIQRQSDYTLFSSATPIVIDNGASYFRIGWAGETQPRVVFRNIVQRPRHKATGETVTVVGDHDPALMKYFDCSRSGPRSAFDSNVVYQFEMMEYILDFGFDRLGATGSEIDHPVLITECVCNPIQSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQQHGVCDKDGLALCPGFNTTHVIPFVDGEPIYKGCCRTNVGGFHVTDYLKQLLSLKYPYHMARFTWEKVDDLKMEHCYIAPDYASEARLFQKKSNEAKEKTRCWQLPWVPPPTEEPPSEEEIARKAAIRERQGQRLREMAEAKRSSRINELENEWHGLEFLLKQLEQVEDNDIPSFLAETGYVSRQEIESARTKVTQSLRKAKGEPKSEQAETEKADSATNEKYSLINIPDDMLSPEQIAEKKKQLSLKSMSDGRQRLKQKRYQEELERERKQQLEEEKRLENPELYLEQLRAKYKDLSEKVEQRKRLKTNGDHSNGNNLSGGIGRGERLHAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDDDGDEGADENDTELARISSKLQELDPTFVPKSETGSSQSAEASRAPPLTKEDFQIAFGVERFRCPEILFNPNWIAVDQAGLDEMAGVSIRRLSCKDEGLEERLTNSILVTGGSSIFPGIIERLEAGIRMIRPCGSPIKVVRALDPVMDAWRGAAAYATIPLFHTQTFSRMDYFEKGEDWLRSYQLKYSL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02667 753 FunFam ARP5 actin-related protein 5 homolog 643 712 - -
Phco2g02667 753 Gene3D - 50 201 - -
Phco2g02667 753 MobiDBLite consensus disorder prediction 436 458 - -
Phco2g02667 753 SUPERFAMILY Actin-like ATPase domain 203 746 IPR043129 -
Phco2g02667 753 MobiDBLite consensus disorder prediction 387 412 - -
Phco2g02667 753 SMART actin_3 51 749 IPR004000 -
Phco2g02667 753 Coils Coil 341 361 - -
Phco2g02667 753 FunFam Putative actin-related protein 5 713 741 - -
Phco2g02667 753 Gene3D - 643 712 - -
Phco2g02667 753 Pfam Actin 618 745 IPR004000 -
Phco2g02667 753 Pfam Actin 51 395 IPR004000 -
Phco2g02667 753 Gene3D - 713 741 - -
Phco2g02667 753 FunFam Actin-related protein 5 50 202 - -
Phco2g02667 753 Gene3D - 206 234 - -
Phco2g02667 753 MobiDBLite consensus disorder prediction 589 611 - -
Phco2g02667 753 MobiDBLite consensus disorder prediction 387 413 - -
Phco2g02667 753 MobiDBLite consensus disorder prediction 593 608 - -
Phco2g02667 753 Gene3D Actin; Chain A, domain 4 235 291 - -
Phco2g02667 753 Coils Coil 481 501 - -
Phco2g02667 753 Coils Coil 451 477 - -
Phco2g02667 753 PANTHER ACTIN 53 741 IPR004000 -
Phco2g02667 753 CDD NBD_sugar-kinase_HSP70_actin 54 234 - -
Phco2g02667 753 MobiDBLite consensus disorder prediction 495 519 - -
Phco2g02667 753 SUPERFAMILY Actin-like ATPase domain 51 191 IPR043129 -
Phco2g02667 753 FunFam Actin-related protein 5 203 234 - -
Phco2g02667 753 Gene3D Actin; Chain A, domain 4 577 642 - -
Phco2g02667 753 FunFam Actin-related protein 5 235 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02667 Phco-Chr2 56315100 56320609 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02667 2 56315100 56320609 Phco2g02667 2 56315100 56320609 ECH
Phco2g02667 2 56315100 56320609 Phco3g00629 3 5042065 5047846 PCT