Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02662 ATGGATTTTTTTTCTTCTACAACATGCTTTTTCACTTTTTTATGCCATGCCATCAATGCTCTTCAACAGCGTGGTCAATTACTCACTCAATGGAACTGCGCAAAACCCGAAAATCAGAATATCCAAATTAGGATTTTTGTTCTTTCATTACTTCGTCTTTCCTGTAGTGGCTTAGTTCATACAGATCCATTTTCAAGGAACTTCCAATTTTTTTTTTCAGAGTTCTGTGTAATTACGGGACTTCGTGGTAGAGTGAAAAGAGGGGGAAAACATGATCAGGGCTTAACATTTTTTGTGGAGCTGAAGGCGTCGATTTTTAAGGAGCTTCCGTTTCTGAGAGGAGGTGGAATAATACTAAAAATAATAATACTCCTTGGAGGAACTGTAATGGCTCAAAGCAGCTCTGATGAGGATACTGATATTAGTGAATCTGAAATTAGTGAGTACGAAGATAAATCCTATGAAGAACTGAAAAGTGGAAGTCAGAATTTGAAAACATCGGATGAGACTTTCACTTGTCCGTACTGCCCTAAAAAGAGAAAACGGGATTATTTGTACAAGGAGCTCCTTCAACATGCTTCTGGGGTGGGTCAGAGTAGCTCACAAAAGAGGAAAGCTAGAGACAAGGCTAATCATTTGGCTTTAGTGAAATATTTAGAAAATGATCTCATGAATGTAGATGTTCCATCAAATAATTCAAAACCGGAAGATGAAAGTGATTCTTCTGTTAATTCTAATGATCAGTTTGTGTGGCCTTGGATTGGAATTGTAGTTAATATTCCTACTAGACGGACAGAAGATGGACGCTCTGTTGGTGAGAGCGGTTCCAGGCTGAGGGATGAGTACAGAATCCGGGGTTTCAACCCAGTTCGAGTCAATCCTTTGTGGAATTTTCGGGGTCATTCTGGAACTGCTCTTGTGGAATTCAATAAAAACTGGCCAGGCTTAGATAATGCAATGGCATTTGAAAGAGCGTATGAATTAGATCATCATGGAAAAAAAGATTGGTTTGCTAATTGTGGACTGAAGTCTGGTCTTTATGCATGGGTTGCCCGAGCCAATGACTACAACATGAACAACATCTATGGAGAATATCTGCGGAAGATGGGTGATGTGAAAACCATATCTGAGCTTATGGAAGAAGAAGCTCGAAGGCAAGATAAACTTGTCTCCAATTTGAATAACATTATTCAGGTCAAGAACAACCACATAAAAGAGATTAAAGTGAGATACGATGAAACTACTGACAAAATGAACCTTGCTATGATGGAAAAAGATAAACTCAGTCAAGCTTATAATGAAGAGATACAGAAAATGTGGTCAAGTGCCAGGGATCACTGCCAGAAGATTTTTACTGATCATGAAAAGCTTAAAATGCAACTGGAATCTCAGAAAAACGAGCTTGAATTACGGAAAATTGAATTAGAAAAACGTGAGGCACATAATGAAAGTGAAAGAAAAAAGTTGGCAGAAGAAATCGAGGAGAATGCAACAAAAAATAGTTCTCTTCAGATGGCTACTCTTGAGCAAAAGAAATCAGACGAAAATGTTATGAAACTGGCTGAAGATCAAAAGAGGCAAAAAGAGCAACTCCATGCTAAAATCATTCAGCTTCAGAAACAACTTGATATGAAACAAGAGCTGGAGTTGGAGATTCAGCAGTTAAAAGGATCTTTAAGTGTATTGAAGCACATGGAAGATGACGAAGATGTTGAAATTCTGAAGAAAGTAGATAATTTACAAAAGGATTTAAGAGACAAGGAACAATCACTGCAAGACATTGATGCACTTAATCAAACATTAATAATTAAAGAGCGTGAGAGTAATGATGAGCTGCAGGAAGCCCGACAAGCATTGGTTGATGGAGTTAAAGAGTTACCATCTCATGGAAATGTTCGTTTAAAGAGAATGGGGGAACTTGACAGTAGACCATTCCTTGAAGCAATGAAAAAAAGATACAATGAAGAGGATGCTGAAGAGAGAGCTTCAGAACTGTGCTCGTTGTGGGAAGAGTATCTAAAGGACCCAGATTGGCATCCATTCAAAGTTATCATGGATGATAATGGGAAAGAAAAGGAAATTATTAGGAATGACGATGAAAAGCTGAACGGGTTGAAAAAAGAGCTGGGCGAAGGTGCATATAACGCAGTGGTGGAGGCATTGTCAGAAATAAATGAACATAATCCTAGTGGCCGGTACTTAACCTCGGTATTATGGAACTATAAACAAGGAAGAAGAGCTACTCTTAAAGAAGGAGTACAATTTCTGTTGAATCATTGGAAAGTTCTTAAACGCAAGAGGGGAATGATGTGA 2313 0.3831 MDFFSSTTCFFTFLCHAINALQQRGQLLTQWNCAKPENQNIQIRIFVLSLLRLSCSGLVHTDPFSRNFQFFFSEFCVITGLRGRVKRGGKHDQGLTFFVELKASIFKELPFLRGGGIILKIIILLGGTVMAQSSSDEDTDISESEISEYEDKSYEELKSGSQNLKTSDETFTCPYCPKKRKRDYLYKELLQHASGVGQSSSQKRKARDKANHLALVKYLENDLMNVDVPSNNSKPEDESDSSVNSNDQFVWPWIGIVVNIPTRRTEDGRSVGESGSRLRDEYRIRGFNPVRVNPLWNFRGHSGTALVEFNKNWPGLDNAMAFERAYELDHHGKKDWFANCGLKSGLYAWVARANDYNMNNIYGEYLRKMGDVKTISELMEEEARRQDKLVSNLNNIIQVKNNHIKEIKVRYDETTDKMNLAMMEKDKLSQAYNEEIQKMWSSARDHCQKIFTDHEKLKMQLESQKNELELRKIELEKREAHNESERKKLAEEIEENATKNSSLQMATLEQKKSDENVMKLAEDQKRQKEQLHAKIIQLQKQLDMKQELELEIQQLKGSLSVLKHMEDDEDVEILKKVDNLQKDLRDKEQSLQDIDALNQTLIIKERESNDELQEARQALVDGVKELPSHGNVRLKRMGELDSRPFLEAMKKRYNEEDAEERASELCSLWEEYLKDPDWHPFKVIMDDNGKEKEIIRNDDEKLNGLKKELGEGAYNAVVEALSEINEHNPSGRYLTSVLWNYKQGRRATLKEGVQFLLNHWKVLKRKRGMM 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02662 770 MobiDBLite consensus disorder prediction 479 495 - -
Phco2g02662 770 Pfam XH domain 635 766 IPR005379 -
Phco2g02662 770 MobiDBLite consensus disorder prediction 226 245 - -
Phco2g02662 770 MobiDBLite consensus disorder prediction 479 499 - -
Phco2g02662 770 CDD RRM_like_XS 249 356 IPR005380 GO:0031047
Phco2g02662 770 Pfam XS domain 247 357 IPR005380 GO:0031047
Phco2g02662 770 Coils Coil 451 495 - -
Phco2g02662 770 Gene3D XS domain 241 411 IPR038588 -
Phco2g02662 770 Coils Coil 521 565 - -
Phco2g02662 770 Pfam XS zinc finger domain 173 216 IPR005381 GO:0031047
Phco2g02662 770 PANTHER RIBONUCLEASE P SUBUNIT P38 134 768 IPR045177 GO:0080188
Phco2g02662 770 Coils Coil 577 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02662 Phco-Chr2 56262077 56269402 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02662 2 56262077 56269402 Phco2g02662 2 56262077 56269402 ECH
Phco2g02662 2 56262077 56269402 Phco3g00626 3 5013945 5022381 PCT