Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02653 ATGGAGAGTCCCCATTCCCTCTCTCCCTCATCTTCCTCCTCTTATTCCTCCGACGGTGTCACTTTCGACACGGAGGAGCCACGGACGCCGCTCGCCGTACGCCGCGCGTTGCACCTCATCAACTCCGGCGAGCCTCATCTCTGCCTCCAAGCCGCTCGTGACATCCGCCGACTCACCAAGACGTCCCAGCGTTGTCGACGCCAACTGTCTCAGGCTGTCGGTCCACTCGTTTCTATGCTCCGAGTCGACTCGCCCGAGTCACACGAATCCGCTCTTCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGAACAAAATCAGTATTGTGGAGGCTGGTGCATTAGAACCGATAGTTAATTTCCTCAAGTCTCAAAATCTAAATCTGCAGGAGTCTGCAACTGCATCATTGCTCACACTATCTGCCTCTTCGACCAACAAACCAATTATCAGTGCCTGTGGTGCCATTCCTCTTCTTGTAGAGATCCTTAGGGACGGAAGCCCCCAAGCTAAAGCTGATGCAGTAATGGCTCTCTCTAATTTATCAACACACCCTACTAATCTCAGCTCCATTCTTGAGACAAACCCAATCCCTTCCGTGGTTGATCTTCTTAAAAAATGTAAAAAGTCCTCAAAAACAGCTGAAAAATGCTGCGCTTTGATAGAATCCTTGGTGGACTATGATGAGGGCAGAACTGCCTTGACATCTGAGGAAGGCGGGGTTCTGGCAGTTGTGGAAGTTCTTGAAAGTGGCACTCTCCAAAGTAGGGAGCATGCTGTTGGAGCACTGTTGACAATGTGCAAAAGCGACCGATGTAAATACCGGGAACCAATTCTAAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACTGTTCAAGGGACACCTAAGTCTCAGTCAAAAGCACGCACCCTTTTGCAGTTACTGCGGGAGTCTCCTTATCCGAGATCTGAAATTCAACCTGACACTCTGGAGAATATAGTATGCAACATCATATCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAAATGCTGGCTGAGATGGTTCAAGTAAGCATGGAACAAAGTCTGAGGCATTTACAACAAAGAGCTCTCGTGTGCACCCCAAGTGATCTTCCTATAGCTGGCTGTGCTTCTGAGGTTTCTTCAAAATGA 1164 0.4871 MESPHSLSPSSSSSYSSDGVTFDTEEPRTPLAVRRALHLINSGEPHLCLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRVDSPESHESALLALLNLAVKDEKNKISIVEAGALEPIVNFLKSQNLNLQESATASLLTLSASSTNKPIISACGAIPLLVEILRDGSPQAKADAVMALSNLSTHPTNLSSILETNPIPSVVDLLKKCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCKSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCASEVSSK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02653 387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 113 155 IPR000225 GO:0005515
Phco2g02653 387 PANTHER U BOX DOMAIN-CONTAINING 32 315 - -
Phco2g02653 387 Pfam Armadillo/beta-catenin-like repeat 103 140 IPR000225 GO:0005515
Phco2g02653 387 Pfam Armadillo/beta-catenin-like repeat 146 182 IPR000225 GO:0005515
Phco2g02653 387 SUPERFAMILY ARM repeat 33 337 IPR016024 -
Phco2g02653 387 Gene3D - 18 188 IPR011989 -
Phco2g02653 387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 154 196 IPR000225 GO:0005515
Phco2g02653 387 MobiDBLite consensus disorder prediction 1 27 - -
Phco2g02653 387 Gene3D - 191 364 IPR011989 -
Phco2g02653 387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 71 113 IPR000225 GO:0005515
Phco2g02653 387 SMART arm_5 102 142 IPR000225 GO:0005515
Phco2g02653 387 SMART arm_5 184 226 IPR000225 GO:0005515
Phco2g02653 387 SMART arm_5 143 183 IPR000225 GO:0005515
Phco2g02653 387 SMART arm_5 61 100 IPR000225 GO:0005515
Phco2g02653 387 SMART arm_5 228 268 IPR000225 GO:0005515
Phco2g02653 387 MobiDBLite consensus disorder prediction 1 23 - -
Phco2g02653 387 FunFam U-box domain-containing protein 4 17 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02653 Phco-Chr2 56203998 56207509 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02653 2 56203998 56207509 Phco2g02653 2 56203998 56207509 ECH
Phco2g02653 2 56203998 56207509 Phco3g00604 3 4873982 4877193 PCT