Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02647 ATGGAAACGAGCACGGATATGACGCTCTCTTTTCAGCATCCTCTTCATTGTATCTTCTCTCCATTGCTTCAAGGAATGGTCCCATCCTTTTCAAACGAACATGTCAATGAGATGGTAATACAAACATCAAATTCCATAATGGCTGATGATGATCCACAAGATGTAGCTGATAGGGAACGCATTTTCAAGCATTTTGATTCCAATGGTGATGGCCAAATCAGTTCACAAGAGCTTGGTGAAGCCCTTAAAGCACTTGGATCAGTGACCCCAGATGAAGTGCAACGGATGATGGATGAAATTGACACAGATGGTGATGGCTTCATTTCACATGAAGAGTTCACAGATTTTGCACGAGCCAACCGTGGTCTAGTGAGGGATGTAGCCAAGATTTTTTAA 396 0.4242 METSTDMTLSFQHPLHCIFSPLLQGMVPSFSNEHVNEMVIQTSNSIMADDDPQDVADRERIFKHFDSNGDGQISSQELGEALKALGSVTPDEVQRMMDEIDTDGDGFISHEEFTDFARANRGLVRDVAKIF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02647 131 ProSiteProfiles EF-hand calcium-binding domain profile. 91 123 IPR002048 GO:0005509
Phco2g02647 131 SMART efh_1 92 120 IPR002048 GO:0005509
Phco2g02647 131 SMART efh_1 57 85 IPR002048 GO:0005509
Phco2g02647 131 SUPERFAMILY EF-hand 55 117 IPR011992 -
Phco2g02647 131 CDD EFh 59 118 IPR002048 GO:0005509
Phco2g02647 131 ProSitePatterns EF-hand calcium-binding domain. 101 113 IPR018247 -
Phco2g02647 131 ProSiteProfiles EF-hand calcium-binding domain profile. 53 88 IPR002048 GO:0005509
Phco2g02647 131 FunFam Calmodulin-2 A 47 126 - -
Phco2g02647 131 ProSitePatterns EF-hand calcium-binding domain. 66 78 IPR018247 -
Phco2g02647 131 Gene3D - 48 131 - -
Phco2g02647 131 PANTHER CALCIUM BINDING PROTEIN 38 114 - -
Phco2g02647 131 Pfam EF-hand domain pair 60 117 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02647 Phco-Chr2 56159340 56161446 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02647 2 56159340 56161446 Phco3g00599 3 4837975 4838229 PCT