Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02582 ATGGCTTTTCCGAGGTCCGACTGGTCCCTCGGCCTTCTGGGGAGGCTTCAACTTGCTTGCCACCTCAGGGATGGTGATGAGCTCCTTGAGGCTGACCTTGAAGCTGTGCCGGGTTGGTCTGGGCCTTCTGGACTCGTAGGGAAGCTCTTTAATTTTCAAAATGGGCCACTGAAACCAGGAAAACGAGAAATGGAGATGGAGAAAAGGCGTTCCAAGGGAAGCTTCCTTAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGGTTTGGAGCGATCCTGAGATTTCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACAGAAGTCGCAGCTCACCAGGATAAAGGTGGATGAAATTGGAGCAAGTCCGAGTAACATTCAAAGTTGTGATTTTGAGAGCACCCTTTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCTCCTGGGTTAGTAGCGAGACTCATGGGTTTGGATTCATTGCCGGCTTCGGCAGTCACTGAGTCCTCCTGCACCTCATTTTACGGCTCTACATCTCATGGAGTCTCTCACTGTAATGAGGGTGCTGTTCATTCAGTGAATGAGTTTTTCCCTGCAGACTACATAAATACACTGCTTAAGCTGGAGAAGTCTCAATTGGGTGCCATGGAGTCAAGGGCTAGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCATAATAAACTGCTGTCTCCTATCAAGAGTCCTGGTATTCTGCCCCCAAAAAGTGCTGCCCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCAGCGGTATTTGAGGAATAGAACAGCTTCTACTAGGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTGGAAGCTGCACAATATACATCCGTACCTGGAAAGCCTGTGAATATGAGCAAAACCTATCCTGCAAATGGCAAGCTTAGTGAGAGGAGTAGTAATTTGTCTAAATGCAGTTCAGCATTCAAGGGTTCAGAAAAAAATAGCTCTTGCCATTTAGCCAGTAAAGGAAAACCAGTTTCACTTGCAATCCAAGCCAAAAACAACGCTCATAGTAGAGATACATTGATTTCAAATGGTGATATGAAATGCATGAGACAGAAAGAGAAGAATGAGATGAAGTCAAATCAGCACTCAAGGAGCCAGAAACCAAGTTTACAAAAAGCCATGCAGCAGAGACCTTGCTCAAGTCGGAATGACAATGTGCTAGGGCAGAATAATCAAAAGCAAAATAGCATGATTGCCAAGTGTAAATCAACTTCAAAAATAGATTCCAATAAGCCAACAACACGAGCTCCATCTTCAGAAACTTTTGGAATAATGAAGACAACAAACAAGGGTGCTAAAACTGCCAAAATTCAGCCTAAAAGGTCAAGCACCAGGGCAACTGACATCCAAAAAGAGTTTCCTAGATCCAAATCAGTAAGTACTTCCCGAAAGACAAAGTATATCAGCAGTGATGTTCATGAGGCTAGAGGTCCTGATAATGCAATAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACTACTGATGGAAGTTTTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTAAGAAGAAGTATGCCTGAGTTGTCTTCCGCTACTGAGCAAGTCATCGGAACCAGAAATAGAATTGATGTAAACTCTCTTGGGCACAGTGATAGTTTTTATCCCAAAAAATTGTCATTATCTCCACAAGGGAAACATATGATAGACAGTGATGCTTTAAGTGTCCTGTTGGACAAAAAGCTACAAGAATTGACATCTAGAATTAACTTACCCCAATGTACCTTGGCTGCAGAGGGTAGTTCTTCTGGTTTGGGATCTAGTGTGCAAGACAAAGTTCCCAGTGCGGCAAGCACCATGCCTAAGGAACAAGACAGAAGCCTTTTCCCTGACCTGTTTAGTGATAAACTGGACAGCATTCTTGACTCTCGATCAACTGATGATCCAGTGCTTAGCATGAATCAACAACTGCAGACGTCAGAAGCAAATCAAGATCCTAGTTGTAGCAGCAATAGTGAAAGTGGAAATGATTTAGTTTGTTGGGGTTCTACTTCTGTTGCCGGTTTTGAAACTCTTGTCAGCGAAAGTTACTTGGATAGCGAAGACAGCGCTTGTGCCAGCACAGTTTATTCTTCAATGCAAGATGAAGAAGTCTCTAGTTTTTCCCAGATAAGTGAATCTGTATCACTTGAAAGTGAGGTGAAAGGACCAGAGCAAAGCCCTTCCACATCGGGGGACAGAAATATGACTGTCAAACAAATGAGTGGAATATCTAATTCGGTTGATTTTAAAAGATCAAGTAACACAGAACTTGAATATGTACAGGATATTCTTGGCAATGCAGAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTACAGTAATTATGCCAAATTTATTTGATCTGTTGGAGAATCAGAATAGTAGAGCAGAAAACTATGGAGAAGAGTACTCTAAACTTGAAAGGAAGGCTATATTTGACTGTGTCAGCGAGTTCCTGGAGTTAAGATGCAAGCAAGCTTTCATAGGAACGTGCAAAGTGTGGCCTGGATGGATGATGTCTGTTCAGAGGAAGAGCTGGATGGCAGAGGAGCTGTACAAGGAGATGCTGAGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACAAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATACTAGCTTATTTGATTAATGAATTAGTTTCAGATTTGTTACCTGTTTAA 2916 0.4201 MAFPRSDWSLGLLGRLQLACHLRDGDELLEADLEAVPGWSGPSGLVGKLFNFQNGPLKPGKREMEMEKRRSKGSFLSLFDWNSKSRKKLVWSDPEISKQGKENVENLQKSQLTRIKVDEIGASPSNIQSCDFESTLSICSDEGCGSKAPGLVARLMGLDSLPASAVTESSCTSFYGSTSHGVSHCNEGAVHSVNEFFPADYINTLLKLEKSQLGAMESRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGILPPKSAAHVMEAAAKIIEASPQRYLRNRTASTRPSSVPLRILNLKERLEAAQYTSVPGKPVNMSKTYPANGKLSERSSNLSKCSSAFKGSEKNSSCHLASKGKPVSLAIQAKNNAHSRDTLISNGDMKCMRQKEKNEMKSNQHSRSQKPSLQKAMQQRPCSSRNDNVLGQNNQKQNSMIAKCKSTSKIDSNKPTTRAPSSETFGIMKTTNKGAKTAKIQPKRSSTRATDIQKEFPRSKSVSTSRKTKYISSDVHEARGPDNAINNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPELSSATEQVIGTRNRIDVNSLGHSDSFYPKKLSLSPQGKHMIDSDALSVLLDKKLQELTSRINLPQCTLAAEGSSSGLGSSVQDKVPSAASTMPKEQDRSLFPDLFSDKLDSILDSRSTDDPVLSMNQQLQTSEANQDPSCSSNSESGNDLVCWGSTSVAGFETLVSESYLDSEDSACASTVYSSMQDEEVSSFSQISESVSLESEVKGPEQSPSTSGDRNMTVKQMSGISNSVDFKRSSNTELEYVQDILGNAEFMAEEFAMGQTSTVIMPNLFDLLENQNSRAENYGEEYSKLERKAIFDCVSEFLELRCKQAFIGTCKVWPGWMMSVQRKSWMAEELYKEMLSFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDILAYLINELVSDLLPV 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02582 971 Pfam DUF761-associated sequence motif 140 165 IPR032795 -
Phco2g02582 971 MobiDBLite consensus disorder prediction 639 663 - -
Phco2g02582 971 MobiDBLite consensus disorder prediction 394 524 - -
Phco2g02582 971 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 63 967 - -
Phco2g02582 971 MobiDBLite consensus disorder prediction 762 791 - -
Phco2g02582 971 MobiDBLite consensus disorder prediction 403 485 - -
Phco2g02582 971 Coils Coil 846 866 - -
Phco2g02582 971 Pfam Domain of unknown function (DUF4378) 811 963 IPR025486 -
Phco2g02582 971 MobiDBLite consensus disorder prediction 639 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02582 Phco-Chr2 55628184 55635866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02582 2 55628184 55635866 Phco6g01271 6 12800198 12803899 ECH
Phco2g02582 2 55628184 55635866 Phco2g02582 2 55628184 55635866 ECH
Phco2g02582 2 55628184 55635866 Phco6g01271 6 12800198 12803899 PCT