Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02548 ATGGCCAAGGAACCTTCTCTGTGCCTCTTCCTCCTCTCTTTTCTCATTCTCCTCTCCTCCGGGACTACTGCATCTTCACCCTCTCTTGCTACCGCATTCCTCCACAAAACCAAGATCTCCAAATCTGAGAGTCGGCTTTCTGTTACTGATTACAAGATTTTCAACACTCTCACTGCCACCGACCTGTCAGTTGATTTCTTCTTAAACGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCATCTCCAGTTGCATGGCTGAAAGCTCATCTTTTGAACATTCTTCCACAAGTGGACATCAGAAGCATCATTGTTAGATGTGGCAGTGATTGCTTAGGCCGAGATGAGATGCCTTTACTCATACCTGTTTTGGAATCAATTCATTCGTTTCTCAGCAATCTTCAACTAGGGAGAAAAGTTAAAGTCTCAGTGTCATTTCCGCTTTCGTTCTTAGAGAATTTGAATGCATCCTATGAAAATGATCTTCTTAGGATTGTTGCTTTTGTAAAGAAAATAGATTCATTTATCATGCTGGAAGACGCCGTTGATGGGGAATCAGGAACTGTTCAGTCTGTTATTGAAAGAGCCACACTTGCTTCTATTCTTCCTTGCAAAGATGTTCCTGTGGTTTTCGCAATCAAGAGCAGTGATATTCCTACTTCAATGGAATTAGCTCAATTTAGTGAGGCAGTATCCAAATATCTTGAAGCAGGATCTCGTTTTAATAAAAGGATTGCTGCATTGTATGCAGAAGTACAGACAACCAAAGGTTTTGTACTGGAAGATCTCAAAAGAGAAGAGGGAGAAGGGACAATTCCTTTGATCCTAAGAGAAAAGCCAAGCAAAGTCCACATCAGAAGAATTCTCCAAGTCCCAACCAACTCACCTACCACAGTTTCCCCCACAAATCCAACCCCACCTTCACCAGTCATCTCACCTCCAGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACTAATCCAGGGGCAACACCTGTGACAGTTCCTTCTACCACACCAGCTGTTCCCTTAGCCCCTGTAAATCCAGCCAATCCAGGGGCTCAACCAGTTACCAACCCTGCGAGCTCTTATCCACCCCCACCAGGAAATGGTCCTGTCACAAATGCCCTTCCTCCTCCTCCAAACACAAATTCTCAAGCCATGCCAGGGGGGCAGAGTTGGTGTGTGGCAAAGACTGGAATTTCAGAAGCTACTCTTCAATCAGCACTGGACTATGCTTGTGGAATGCCAAGTGTAGATTGTTCACAAATACAGCAAGGTGGAAGTTGTTACAATCCAAATTCATTACAAAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAGAAGAATGTTGCGTCAACAAGCTGTGACTTTGGAGGCACTGCAACCGTAGTTAACACCAATCCAAGTTCGGGTTCTTGCATTTATCCATCTTCTTCAGGGGCAGGGACATCCGGCTCTATTGGCTCGCCTTCAGTTTCAGGATCCCAAAGCCCTCCTGATTTAAATACCTCAAATTCAGCTGGTCTGAGGCCTTTTCTTGACCATATGGTTCTGGTAGTAATATCCTTAGTCAGCATAAGACTTACTATATGA 1620 0.4401 MAKEPSLCLFLLSFLILLSSGTTASSPSLATAFLHKTKISKSESRLSVTDYKIFNTLTATDLSVDFFLNESLVENFVSSKSSPVAWLKAHLLNILPQVDIRSIIVRCGSDCLGRDEMPLLIPVLESIHSFLSNLQLGRKVKVSVSFPLSFLENLNASYENDLLRIVAFVKKIDSFIMLEDAVDGESGTVQSVIERATLASILPCKDVPVVFAIKSSDIPTSMELAQFSEAVSKYLEAGSRFNKRIAALYAEVQTTKGFVLEDLKREEGEGTIPLILREKPSKVHIRRILQVPTNSPTTVSPTNPTPPSPVISPPDTPTIITVPSTNPVTVSPTNPGATPVTVPSTTPAVPLAPVNPANPGAQPVTNPASSYPPPPGNGPVTNALPPPPNTNSQAMPGGQSWCVAKTGISEATLQSALDYACGMPSVDCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNVASTSCDFGGTATVVNTNPSSGSCIYPSSSGAGTSGSIGSPSVSGSQSPPDLNTSNSAGLRPFLDHMVLVVISLVSIRLTI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02548 539 SMART X8_cls 400 484 IPR012946 -
Phco2g02548 539 Gene3D - 394 490 - -
Phco2g02548 539 Gene3D Glycosidases 19 179 - -
Phco2g02548 539 PANTHER BETA-1,3 GLUCANASE 395 495 IPR044788 -
Phco2g02548 539 FunFam Glucan endo-1,3-beta-glucosidase 4 396 488 - -
Phco2g02548 539 MobiDBLite consensus disorder prediction 353 395 - -
Phco2g02548 539 MobiDBLite consensus disorder prediction 493 512 - -
Phco2g02548 539 Pfam X8 domain 401 471 IPR012946 -
Phco2g02548 539 MobiDBLite consensus disorder prediction 366 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02548 Phco-Chr2 55347591 55350027 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02548 2 55347591 55350027 Phco2g02548 2 55347591 55350027 ECH
Phco2g02548 2 55347591 55350027 Phco6g01320 6 13306954 13309565 PCT